Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cbx3P23198 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cbx3P23198 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.83■■□□□ 1.09
Cbx3P23198 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cbx3P23198 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cbx3P23198 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cbx3P23198 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.83■■□□□ 1.09
Cbx3P23198 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cbx3P23198 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cbx3P23198 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Cbx3P23198 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cbx3P23198 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Cbx3P23198 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cbx3P23198 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.81■■□□□ 1.08
Cbx3P23198 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cbx3P23198 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cbx3P23198 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cbx3P23198 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cbx3P23198 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cbx3P23198 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cbx3P23198 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cbx3P23198 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cbx3P23198 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cbx3P23198 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Cbx3P23198 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cbx3P23198 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.77■■□□□ 1.08
Cbx3P23198 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cbx3P23198 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cbx3P23198 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cbx3P23198 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cbx3P23198 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cbx3P23198 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Cbx3P23198 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Cbx3P23198 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Cbx3P23198 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cbx3P23198 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cbx3P23198 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.75■■□□□ 1.07
Cbx3P23198 Gm25262-201ENSMUST00000174934 133 ntBASIC21.74■■□□□ 1.07
Cbx3P23198 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cbx3P23198 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cbx3P23198 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cbx3P23198 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.73■■□□□ 1.07
Cbx3P23198 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cbx3P23198 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cbx3P23198 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cbx3P23198 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.72■■□□□ 1.07
Cbx3P23198 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.72■■□□□ 1.07
Cbx3P23198 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cbx3P23198 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cbx3P23198 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cbx3P23198 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cbx3P23198 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cbx3P23198 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cbx3P23198 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cbx3P23198 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cbx3P23198 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cbx3P23198 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cbx3P23198 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.69■■□□□ 1.06
Cbx3P23198 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cbx3P23198 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cbx3P23198 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
Cbx3P23198 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cbx3P23198 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Cbx3P23198 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Cbx3P23198 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Cbx3P23198 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Cbx3P23198 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Cbx3P23198 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Cbx3P23198 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Cbx3P23198 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Cbx3P23198 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Cbx3P23198 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cbx3P23198 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Cbx3P23198 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Cbx3P23198 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cbx3P23198 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.64■■□□□ 1.05
Cbx3P23198 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cbx3P23198 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cbx3P23198 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cbx3P23198 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cbx3P23198 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.62■■□□□ 1.05
Cbx3P23198 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Cbx3P23198 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Cbx3P23198 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cbx3P23198 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cbx3P23198 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cbx3P23198 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cbx3P23198 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cbx3P23198 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cbx3P23198 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cbx3P23198 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
Cbx3P23198 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cbx3P23198 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.57■■□□□ 1.04
Cbx3P23198 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Cbx3P23198 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cbx3P23198 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cbx3P23198 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cbx3P23198 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.56■■□□□ 1.04
Cbx3P23198 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cbx3P23198 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms