Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fn1P11276 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.7■□□□□ 0.74
Fn1P11276 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Fn1P11276 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fn1P11276 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.69■□□□□ 0.74
Fn1P11276 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fn1P11276 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.68■□□□□ 0.74
Fn1P11276 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fn1P11276 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fn1P11276 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Fn1P11276 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.68■□□□□ 0.74
Fn1P11276 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fn1P11276 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fn1P11276 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fn1P11276 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Fn1P11276 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.67■□□□□ 0.74
Fn1P11276 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Fn1P11276 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fn1P11276 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.66■□□□□ 0.74
Fn1P11276 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.64■□□□□ 0.74
Fn1P11276 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Fn1P11276 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.63■□□□□ 0.73
Fn1P11276 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Fn1P11276 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Fn1P11276 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Fn1P11276 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Fn1P11276 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Fn1P11276 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.61■□□□□ 0.73
Fn1P11276 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Fn1P11276 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.59■□□□□ 0.73
Fn1P11276 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Fn1P11276 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.59■□□□□ 0.73
Fn1P11276 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.59■□□□□ 0.73
Fn1P11276 Gm5812-201ENSMUST00000061073 957 ntBASIC19.59■□□□□ 0.73
Fn1P11276 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fn1P11276 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Fn1P11276 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fn1P11276 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Fn1P11276 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.58■□□□□ 0.72
Fn1P11276 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Fn1P11276 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Fn1P11276 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Fn1P11276 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fn1P11276 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fn1P11276 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fn1P11276 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fn1P11276 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Fn1P11276 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.56■□□□□ 0.72
Fn1P11276 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fn1P11276 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fn1P11276 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.56■□□□□ 0.72
Fn1P11276 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Fn1P11276 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fn1P11276 Gm4799-201ENSMUST00000095396 657 ntBASIC19.54■□□□□ 0.72
Fn1P11276 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fn1P11276 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fn1P11276 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fn1P11276 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Fn1P11276 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fn1P11276 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.51■□□□□ 0.71
Fn1P11276 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.51■□□□□ 0.71
Fn1P11276 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fn1P11276 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.5■□□□□ 0.71
Fn1P11276 Scarna2-201ENSMUST00000157560 414 ntBASIC19.5■□□□□ 0.71
Fn1P11276 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fn1P11276 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.49■□□□□ 0.71
Fn1P11276 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.49■□□□□ 0.71
Fn1P11276 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.49■□□□□ 0.71
Fn1P11276 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Fn1P11276 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.49■□□□□ 0.71
Fn1P11276 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Fn1P11276 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.48■□□□□ 0.71
Fn1P11276 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Fn1P11276 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Fn1P11276 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fn1P11276 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Fn1P11276 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.45■□□□□ 0.7
Fn1P11276 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fn1P11276 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
Fn1P11276 Gm11687-201ENSMUST00000118911 886 ntBASIC19.44■□□□□ 0.7
Fn1P11276 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Fn1P11276 Gm7332-201ENSMUST00000118351 454 ntBASIC19.43■□□□□ 0.7
Fn1P11276 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fn1P11276 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fn1P11276 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fn1P11276 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fn1P11276 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fn1P11276 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Fn1P11276 Gm9806-201ENSMUST00000051080 552 ntBASIC19.41■□□□□ 0.7
Fn1P11276 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fn1P11276 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fn1P11276 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Fn1P11276 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fn1P11276 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Fn1P11276 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fn1P11276 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fn1P11276 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fn1P11276 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Fn1P11276 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.37■□□□□ 0.69
Fn1P11276 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms