Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
NeflP08551 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.26■■■□□ 2.59
NeflP08551 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NeflP08551 AC153890.1-201ENSMUST00000220021 2469 ntBASIC31.25■■■□□ 2.59
NeflP08551 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
NeflP08551 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NeflP08551 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
NeflP08551 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
NeflP08551 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
NeflP08551 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
NeflP08551 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NeflP08551 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NeflP08551 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
NeflP08551 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
NeflP08551 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NeflP08551 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NeflP08551 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NeflP08551 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.17■■■□□ 2.58
NeflP08551 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
NeflP08551 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
NeflP08551 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
NeflP08551 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
NeflP08551 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
NeflP08551 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
NeflP08551 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
NeflP08551 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
NeflP08551 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
NeflP08551 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC31.13■■■□□ 2.57
NeflP08551 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
NeflP08551 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NeflP08551 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
NeflP08551 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
NeflP08551 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC31.1■■■□□ 2.57
NeflP08551 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
NeflP08551 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
NeflP08551 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
NeflP08551 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
NeflP08551 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
NeflP08551 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC31.09■■■□□ 2.57
NeflP08551 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
NeflP08551 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
NeflP08551 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NeflP08551 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NeflP08551 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
NeflP08551 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.57
NeflP08551 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
NeflP08551 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC31.07■■■□□ 2.56
NeflP08551 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NeflP08551 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
NeflP08551 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC31.06■■■□□ 2.56
NeflP08551 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
NeflP08551 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
NeflP08551 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
NeflP08551 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
NeflP08551 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.05■■■□□ 2.56
NeflP08551 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
NeflP08551 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
NeflP08551 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
NeflP08551 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
NeflP08551 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
NeflP08551 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
NeflP08551 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
NeflP08551 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
NeflP08551 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
NeflP08551 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC31■■■□□ 2.55
NeflP08551 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
NeflP08551 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
NeflP08551 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
NeflP08551 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
NeflP08551 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.97■■■□□ 2.55
NeflP08551 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
NeflP08551 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
NeflP08551 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NeflP08551 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NeflP08551 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NeflP08551 Gm24804-201ENSMUST00000174982 85 ntBASIC30.96■■■□□ 2.55
NeflP08551 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
NeflP08551 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
NeflP08551 Gm16148-201ENSMUST00000119653 893 ntBASIC30.95■■■□□ 2.55
NeflP08551 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
NeflP08551 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.54
NeflP08551 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NeflP08551 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
NeflP08551 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NeflP08551 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC30.93■■■□□ 2.54
NeflP08551 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NeflP08551 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
NeflP08551 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
NeflP08551 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
NeflP08551 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30.91■■■□□ 2.54
NeflP08551 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
NeflP08551 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.91■■■□□ 2.54
NeflP08551 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
NeflP08551 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
NeflP08551 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC30.9■■■□□ 2.54
NeflP08551 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
NeflP08551 Pcf11-205ENSMUST00000208255 1720 ntBASIC30.9■■■□□ 2.54
NeflP08551 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
NeflP08551 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC30.89■■■□□ 2.53
NeflP08551 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Retrieved 100 of 76,532 protein–RNA pairs in 138.7 ms