Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ercc1P07903 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ercc1P07903 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ercc1P07903 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ercc1P07903 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ercc1P07903 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ercc1P07903 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ercc1P07903 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ercc1P07903 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ercc1P07903 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ercc1P07903 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ercc1P07903 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ercc1P07903 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ercc1P07903 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.12■□□□□ 0.81
Ercc1P07903 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ercc1P07903 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ercc1P07903 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Ercc1P07903 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ercc1P07903 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ercc1P07903 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Ercc1P07903 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ercc1P07903 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ercc1P07903 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ercc1P07903 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ercc1P07903 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ercc1P07903 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ercc1P07903 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ercc1P07903 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ercc1P07903 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ercc1P07903 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ercc1P07903 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ercc1P07903 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ercc1P07903 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ercc1P07903 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ercc1P07903 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ercc1P07903 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ercc1P07903 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.05■□□□□ 0.8
Ercc1P07903 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ercc1P07903 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ercc1P07903 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ercc1P07903 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ercc1P07903 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ercc1P07903 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Ercc1P07903 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ercc1P07903 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ercc1P07903 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ercc1P07903 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ercc1P07903 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ercc1P07903 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc1P07903 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc1P07903 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc1P07903 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.99■□□□□ 0.79
Ercc1P07903 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc1P07903 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ercc1P07903 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc1P07903 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.98■□□□□ 0.79
Ercc1P07903 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc1P07903 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc1P07903 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.97■□□□□ 0.79
Ercc1P07903 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc1P07903 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.97■□□□□ 0.79
Ercc1P07903 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc1P07903 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ercc1P07903 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc1P07903 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
Ercc1P07903 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ercc1P07903 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc1P07903 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc1P07903 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc1P07903 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ercc1P07903 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.94■□□□□ 0.78
Ercc1P07903 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ercc1P07903 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc1P07903 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc1P07903 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc1P07903 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc1P07903 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc1P07903 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc1P07903 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.91■□□□□ 0.78
Ercc1P07903 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc1P07903 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc1P07903 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Ercc1P07903 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ercc1P07903 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ercc1P07903 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ercc1P07903 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ercc1P07903 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc1P07903 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ercc1P07903 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
Ercc1P07903 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc1P07903 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc1P07903 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.86■□□□□ 0.77
Ercc1P07903 Gm24804-201ENSMUST00000174982 85 ntBASIC19.86■□□□□ 0.77
Ercc1P07903 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Ercc1P07903 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ercc1P07903 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ercc1P07903 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc1P07903 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc1P07903 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc1P07903 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms