Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cd74P04441 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cd74P04441 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cd74P04441 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cd74P04441 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Cd74P04441 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd74P04441 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cd74P04441 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd74P04441 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.07■□□□□ 0.8
Cd74P04441 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cd74P04441 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd74P04441 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Cd74P04441 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cd74P04441 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Cd74P04441 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd74P04441 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd74P04441 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd74P04441 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd74P04441 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd74P04441 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cd74P04441 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd74P04441 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cd74P04441 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd74P04441 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.05■□□□□ 0.8
Cd74P04441 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cd74P04441 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd74P04441 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd74P04441 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd74P04441 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Cd74P04441 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cd74P04441 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cd74P04441 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cd74P04441 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd74P04441 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd74P04441 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd74P04441 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd74P04441 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cd74P04441 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cd74P04441 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.01■□□□□ 0.79
Cd74P04441 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cd74P04441 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cd74P04441 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd74P04441 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cd74P04441 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cd74P04441 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.98■□□□□ 0.79
Cd74P04441 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cd74P04441 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cd74P04441 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cd74P04441 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cd74P04441 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.96■□□□□ 0.79
Cd74P04441 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cd74P04441 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cd74P04441 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cd74P04441 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Cd74P04441 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cd74P04441 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.95■□□□□ 0.78
Cd74P04441 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cd74P04441 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cd74P04441 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd74P04441 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cd74P04441 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cd74P04441 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cd74P04441 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cd74P04441 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cd74P04441 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cd74P04441 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.92■□□□□ 0.78
Cd74P04441 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cd74P04441 Gm6821-201ENSMUST00000107540 542 ntBASIC19.91■□□□□ 0.78
Cd74P04441 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.91■□□□□ 0.78
Cd74P04441 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.91■□□□□ 0.78
Cd74P04441 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cd74P04441 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cd74P04441 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cd74P04441 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cd74P04441 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cd74P04441 Gm8503-201ENSMUST00000118131 455 ntBASIC19.89■□□□□ 0.77
Cd74P04441 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Cd74P04441 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cd74P04441 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cd74P04441 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cd74P04441 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cd74P04441 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cd74P04441 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.87■□□□□ 0.77
Cd74P04441 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd74P04441 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd74P04441 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd74P04441 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd74P04441 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd74P04441 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cd74P04441 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cd74P04441 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.84■□□□□ 0.77
Cd74P04441 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cd74P04441 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cd74P04441 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cd74P04441 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cd74P04441 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd74P04441 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.82■□□□□ 0.76
Cd74P04441 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cd74P04441 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cd74P04441 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 117.2 ms