Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P04224 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.01■□□□□ 0.95
P04224 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
P04224 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P04224 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.01■□□□□ 0.95
P04224 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21■□□□□ 0.95
P04224 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21■□□□□ 0.95
P04224 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
P04224 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
P04224 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
P04224 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
P04224 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P04224 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
P04224 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04224 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04224 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04224 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04224 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04224 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P04224 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
P04224 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P04224 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.95■□□□□ 0.94
P04224 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
P04224 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
P04224 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P04224 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
P04224 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P04224 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
P04224 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
P04224 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
P04224 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P04224 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04224 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
P04224 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
P04224 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
P04224 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04224 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04224 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04224 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P04224 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
P04224 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
P04224 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04224 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04224 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
P04224 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
P04224 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04224 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04224 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04224 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
P04224 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
P04224 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
P04224 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.85■□□□□ 0.93
P04224 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04224 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.85■□□□□ 0.93
P04224 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.84■□□□□ 0.93
P04224 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
P04224 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
P04224 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
P04224 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
P04224 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04224 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04224 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04224 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04224 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04224 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04224 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04224 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04224 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04224 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04224 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.8■□□□□ 0.92
P04224 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04224 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
P04224 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04224 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
P04224 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04224 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04224 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
P04224 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04224 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
P04224 Gm26115-201ENSMUST00000175605 87 ntBASIC20.76■□□□□ 0.91
P04224 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04224 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04224 Peli2-204ENSMUST00000226513 1320 ntBASIC20.76■□□□□ 0.91
P04224 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P04224 Gm8109-201ENSMUST00000194076 746 ntBASIC20.75■□□□□ 0.91
P04224 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P04224 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
P04224 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
P04224 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
P04224 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
P04224 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
P04224 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.72■□□□□ 0.91
P04224 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
P04224 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
P04224 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P04224 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P04224 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
P04224 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P04224 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
P04224 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms