Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ifna1P01572 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ifna1P01572 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ifna1P01572 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ifna1P01572 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ifna1P01572 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ifna1P01572 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ifna1P01572 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ifna1P01572 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ifna1P01572 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ifna1P01572 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Ifna1P01572 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ifna1P01572 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ifna1P01572 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ifna1P01572 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ifna1P01572 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ifna1P01572 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ifna1P01572 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ifna1P01572 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ifna1P01572 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ifna1P01572 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ifna1P01572 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ifna1P01572 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ifna1P01572 Gm26115-201ENSMUST00000175605 87 ntBASIC20.25■□□□□ 0.83
Ifna1P01572 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ifna1P01572 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ifna1P01572 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Ifna1P01572 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ifna1P01572 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ifna1P01572 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ifna1P01572 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ifna1P01572 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ifna1P01572 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.24■□□□□ 0.83
Ifna1P01572 Gm8109-201ENSMUST00000194076 746 ntBASIC20.24■□□□□ 0.83
Ifna1P01572 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ifna1P01572 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ifna1P01572 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ifna1P01572 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ifna1P01572 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ifna1P01572 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ifna1P01572 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ifna1P01572 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.21■□□□□ 0.83
Ifna1P01572 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ifna1P01572 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ifna1P01572 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ifna1P01572 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ifna1P01572 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ifna1P01572 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ifna1P01572 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.2■□□□□ 0.82
Ifna1P01572 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
Ifna1P01572 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ifna1P01572 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ifna1P01572 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ifna1P01572 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ifna1P01572 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ifna1P01572 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ifna1P01572 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Ifna1P01572 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.17■□□□□ 0.82
Ifna1P01572 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ifna1P01572 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ifna1P01572 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ifna1P01572 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ifna1P01572 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ifna1P01572 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ifna1P01572 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Ifna1P01572 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ifna1P01572 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.13■□□□□ 0.81
Ifna1P01572 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ifna1P01572 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.13■□□□□ 0.81
Ifna1P01572 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ifna1P01572 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ifna1P01572 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ifna1P01572 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ifna1P01572 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ifna1P01572 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ifna1P01572 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Ifna1P01572 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ifna1P01572 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ifna1P01572 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ifna1P01572 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ifna1P01572 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ifna1P01572 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ifna1P01572 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ifna1P01572 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ifna1P01572 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ifna1P01572 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ifna1P01572 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ifna1P01572 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.09■□□□□ 0.81
Ifna1P01572 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ifna1P01572 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ifna1P01572 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.08■□□□□ 0.81
Ifna1P01572 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ifna1P01572 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ifna1P01572 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ifna1P01572 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ifna1P01572 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.06■□□□□ 0.8
Ifna1P01572 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ifna1P01572 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ifna1P01572 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ifna1P01572 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms