Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CcnkO88874 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CcnkO88874 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CcnkO88874 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CcnkO88874 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CcnkO88874 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CcnkO88874 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.19■□□□□ 0.98
CcnkO88874 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CcnkO88874 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CcnkO88874 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CcnkO88874 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CcnkO88874 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CcnkO88874 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CcnkO88874 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.18■□□□□ 0.98
CcnkO88874 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CcnkO88874 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CcnkO88874 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CcnkO88874 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CcnkO88874 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CcnkO88874 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CcnkO88874 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CcnkO88874 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CcnkO88874 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CcnkO88874 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.15■□□□□ 0.98
CcnkO88874 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CcnkO88874 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CcnkO88874 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CcnkO88874 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CcnkO88874 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CcnkO88874 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CcnkO88874 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CcnkO88874 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CcnkO88874 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CcnkO88874 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CcnkO88874 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CcnkO88874 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CcnkO88874 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CcnkO88874 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CcnkO88874 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
CcnkO88874 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CcnkO88874 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.08■□□□□ 0.97
CcnkO88874 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CcnkO88874 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CcnkO88874 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CcnkO88874 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CcnkO88874 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CcnkO88874 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CcnkO88874 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CcnkO88874 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CcnkO88874 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CcnkO88874 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CcnkO88874 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CcnkO88874 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CcnkO88874 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CcnkO88874 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CcnkO88874 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CcnkO88874 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CcnkO88874 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CcnkO88874 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CcnkO88874 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CcnkO88874 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CcnkO88874 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CcnkO88874 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CcnkO88874 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CcnkO88874 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CcnkO88874 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CcnkO88874 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CcnkO88874 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CcnkO88874 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CcnkO88874 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CcnkO88874 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CcnkO88874 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CcnkO88874 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CcnkO88874 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CcnkO88874 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.97■□□□□ 0.95
CcnkO88874 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CcnkO88874 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CcnkO88874 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CcnkO88874 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CcnkO88874 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CcnkO88874 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CcnkO88874 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CcnkO88874 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CcnkO88874 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CcnkO88874 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CcnkO88874 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CcnkO88874 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.94■□□□□ 0.94
CcnkO88874 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.94■□□□□ 0.94
CcnkO88874 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.93■□□□□ 0.94
CcnkO88874 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CcnkO88874 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CcnkO88874 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CcnkO88874 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CcnkO88874 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.92■□□□□ 0.94
CcnkO88874 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CcnkO88874 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CcnkO88874 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CcnkO88874 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.91■□□□□ 0.94
CcnkO88874 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CcnkO88874 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms