Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Becn1O88597 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Becn1O88597 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Becn1O88597 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Becn1O88597 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
Becn1O88597 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Becn1O88597 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Becn1O88597 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.34■■□□□ 1.97
Becn1O88597 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Becn1O88597 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Becn1O88597 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Becn1O88597 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Becn1O88597 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Becn1O88597 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Becn1O88597 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Becn1O88597 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Becn1O88597 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
Becn1O88597 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Becn1O88597 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Becn1O88597 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
Becn1O88597 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Becn1O88597 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Becn1O88597 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Becn1O88597 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
Becn1O88597 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC27.27■■□□□ 1.96
Becn1O88597 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
Becn1O88597 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Becn1O88597 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Becn1O88597 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Becn1O88597 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.24■■□□□ 1.95
Becn1O88597 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Becn1O88597 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Becn1O88597 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Becn1O88597 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Becn1O88597 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Becn1O88597 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
Becn1O88597 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Becn1O88597 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Becn1O88597 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Becn1O88597 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Becn1O88597 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC27.2■■□□□ 1.94
Becn1O88597 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Becn1O88597 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Becn1O88597 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Becn1O88597 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Becn1O88597 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Becn1O88597 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Becn1O88597 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Becn1O88597 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Becn1O88597 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Becn1O88597 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Becn1O88597 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Becn1O88597 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Becn1O88597 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Becn1O88597 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Becn1O88597 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Becn1O88597 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Becn1O88597 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC27.13■■□□□ 1.93
Becn1O88597 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Becn1O88597 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Becn1O88597 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Becn1O88597 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Becn1O88597 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Becn1O88597 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Becn1O88597 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Becn1O88597 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Becn1O88597 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Becn1O88597 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
Becn1O88597 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Becn1O88597 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Becn1O88597 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
Becn1O88597 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Becn1O88597 Gm17641-201ENSMUST00000166328 2350 ntBASIC27.07■■□□□ 1.92
Becn1O88597 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Becn1O88597 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC27.06■■□□□ 1.92
Becn1O88597 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Becn1O88597 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Becn1O88597 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.06■■□□□ 1.92
Becn1O88597 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.06■■□□□ 1.92
Becn1O88597 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Becn1O88597 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
Becn1O88597 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Becn1O88597 Peli2-204ENSMUST00000226513 1320 ntBASIC27.05■■□□□ 1.92
Becn1O88597 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
Becn1O88597 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.04■■□□□ 1.92
Becn1O88597 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Becn1O88597 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
Becn1O88597 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC27.03■■□□□ 1.92
Becn1O88597 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Becn1O88597 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Becn1O88597 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Becn1O88597 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.02■■□□□ 1.92
Becn1O88597 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Becn1O88597 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Becn1O88597 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Becn1O88597 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
Becn1O88597 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.92
Becn1O88597 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Becn1O88597 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Becn1O88597 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms