Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Gm7432-201ENSMUST00000210343 879 ntBASIC24.12■■□□□ 1.45
Tspan6O70401 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Tspan6O70401 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Tspan6O70401 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Tspan6O70401 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.1■■□□□ 1.45
Tspan6O70401 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.09■■□□□ 1.45
Tspan6O70401 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Tspan6O70401 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Tspan6O70401 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.07■■□□□ 1.44
Tspan6O70401 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Tspan6O70401 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Tspan6O70401 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Tspan6O70401 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Tspan6O70401 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tspan6O70401 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Tspan6O70401 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Tspan6O70401 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tspan6O70401 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.02■■□□□ 1.44
Tspan6O70401 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tspan6O70401 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Tspan6O70401 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24■■□□□ 1.43
Tspan6O70401 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24■■□□□ 1.43
Tspan6O70401 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Tspan6O70401 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.98■■□□□ 1.43
Tspan6O70401 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tspan6O70401 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.97■■□□□ 1.43
Tspan6O70401 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Tspan6O70401 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Tspan6O70401 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Tspan6O70401 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Tspan6O70401 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Tspan6O70401 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Tspan6O70401 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Tspan6O70401 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tspan6O70401 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tspan6O70401 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.94■■□□□ 1.42
Tspan6O70401 Gm11599-201ENSMUST00000118720 878 ntBASIC23.94■■□□□ 1.42
Tspan6O70401 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.94■■□□□ 1.42
Tspan6O70401 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.94■■□□□ 1.42
Tspan6O70401 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.94■■□□□ 1.42
Tspan6O70401 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.94■■□□□ 1.42
Tspan6O70401 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Tspan6O70401 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
Tspan6O70401 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Tspan6O70401 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Tspan6O70401 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.9■■□□□ 1.42
Tspan6O70401 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Tspan6O70401 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Tspan6O70401 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Tspan6O70401 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Tspan6O70401 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Tspan6O70401 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.86■■□□□ 1.41
Tspan6O70401 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Tspan6O70401 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Tspan6O70401 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tspan6O70401 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Tspan6O70401 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.84■■□□□ 1.41
Tspan6O70401 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tspan6O70401 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tspan6O70401 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.83■■□□□ 1.41
Tspan6O70401 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Tspan6O70401 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Tspan6O70401 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Tspan6O70401 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Tspan6O70401 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.81■■□□□ 1.4
Tspan6O70401 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Tspan6O70401 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.81■■□□□ 1.4
Tspan6O70401 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Tspan6O70401 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Tspan6O70401 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Tspan6O70401 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tspan6O70401 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Tspan6O70401 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.79■■□□□ 1.4
Tspan6O70401 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Tspan6O70401 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Tspan6O70401 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.78■■□□□ 1.4
Tspan6O70401 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Tspan6O70401 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Tspan6O70401 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Tspan6O70401 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.77■■□□□ 1.4
Tspan6O70401 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tspan6O70401 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Tspan6O70401 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Tspan6O70401 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.74■■□□□ 1.39
Tspan6O70401 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tspan6O70401 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tspan6O70401 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Tspan6O70401 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Tspan6O70401 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.72■■□□□ 1.39
Tspan6O70401 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tspan6O70401 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Tspan6O70401 Gm30023-201ENSMUST00000197970 889 ntBASIC23.71■■□□□ 1.39
Tspan6O70401 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tspan6O70401 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.71■■□□□ 1.39
Tspan6O70401 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Tspan6O70401 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
Tspan6O70401 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Tspan6O70401 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.7■■□□□ 1.38
Tspan6O70401 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Tspan6O70401 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms