Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sigmar1O55242 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sigmar1O55242 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sigmar1O55242 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sigmar1O55242 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sigmar1O55242 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sigmar1O55242 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sigmar1O55242 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.68■□□□□ 0.26
Sigmar1O55242 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sigmar1O55242 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sigmar1O55242 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sigmar1O55242 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sigmar1O55242 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sigmar1O55242 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sigmar1O55242 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.67■□□□□ 0.26
Sigmar1O55242 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sigmar1O55242 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sigmar1O55242 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sigmar1O55242 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Sigmar1O55242 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sigmar1O55242 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sigmar1O55242 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sigmar1O55242 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sigmar1O55242 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sigmar1O55242 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sigmar1O55242 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Sigmar1O55242 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sigmar1O55242 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sigmar1O55242 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Sigmar1O55242 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
Sigmar1O55242 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sigmar1O55242 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sigmar1O55242 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sigmar1O55242 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Sigmar1O55242 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sigmar1O55242 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sigmar1O55242 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sigmar1O55242 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sigmar1O55242 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sigmar1O55242 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sigmar1O55242 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sigmar1O55242 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sigmar1O55242 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sigmar1O55242 Zfp131-207ENSMUST00000224946 1783 ntBASIC16.6■□□□□ 0.25
Sigmar1O55242 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sigmar1O55242 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Sigmar1O55242 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sigmar1O55242 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sigmar1O55242 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sigmar1O55242 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sigmar1O55242 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Sigmar1O55242 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sigmar1O55242 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sigmar1O55242 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.58■□□□□ 0.24
Sigmar1O55242 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Sigmar1O55242 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
Sigmar1O55242 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sigmar1O55242 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sigmar1O55242 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.57■□□□□ 0.24
Sigmar1O55242 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC16.57■□□□□ 0.24
Sigmar1O55242 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sigmar1O55242 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sigmar1O55242 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sigmar1O55242 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sigmar1O55242 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sigmar1O55242 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Sigmar1O55242 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sigmar1O55242 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sigmar1O55242 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sigmar1O55242 Notumos-201ENSMUST00000151998 2659 ntBASIC16.54■□□□□ 0.24
Sigmar1O55242 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sigmar1O55242 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sigmar1O55242 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sigmar1O55242 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sigmar1O55242 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sigmar1O55242 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sigmar1O55242 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sigmar1O55242 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sigmar1O55242 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sigmar1O55242 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sigmar1O55242 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Sigmar1O55242 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sigmar1O55242 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sigmar1O55242 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sigmar1O55242 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sigmar1O55242 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sigmar1O55242 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sigmar1O55242 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sigmar1O55242 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sigmar1O55242 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sigmar1O55242 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sigmar1O55242 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sigmar1O55242 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.5■□□□□ 0.23
Sigmar1O55242 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sigmar1O55242 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sigmar1O55242 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sigmar1O55242 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sigmar1O55242 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sigmar1O55242 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sigmar1O55242 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms