Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Kcnu1O54982 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Kcnu1O54982 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Kcnu1O54982 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Kcnu1O54982 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.09■■□□□ 1.77
Kcnu1O54982 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
Kcnu1O54982 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Kcnu1O54982 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Kcnu1O54982 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.05■■□□□ 1.76
Kcnu1O54982 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Kcnu1O54982 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Kcnu1O54982 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Kcnu1O54982 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Kcnu1O54982 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Kcnu1O54982 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Kcnu1O54982 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Kcnu1O54982 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Kcnu1O54982 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Kcnu1O54982 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Kcnu1O54982 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26■■□□□ 1.75
Kcnu1O54982 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26■■□□□ 1.75
Kcnu1O54982 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Kcnu1O54982 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.99■■□□□ 1.75
Kcnu1O54982 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Kcnu1O54982 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Kcnu1O54982 Zfp131-205ENSMUST00000223812 663 ntBASIC25.96■■□□□ 1.75
Kcnu1O54982 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Kcnu1O54982 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Kcnu1O54982 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.94■■□□□ 1.74
Kcnu1O54982 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
Kcnu1O54982 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Kcnu1O54982 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Kcnu1O54982 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Kcnu1O54982 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Kcnu1O54982 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Kcnu1O54982 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Kcnu1O54982 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Kcnu1O54982 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
Kcnu1O54982 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.91■■□□□ 1.74
Kcnu1O54982 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Kcnu1O54982 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Kcnu1O54982 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Kcnu1O54982 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Kcnu1O54982 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Kcnu1O54982 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Kcnu1O54982 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Kcnu1O54982 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Kcnu1O54982 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.88■■□□□ 1.73
Kcnu1O54982 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Kcnu1O54982 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Kcnu1O54982 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.87■■□□□ 1.73
Kcnu1O54982 Gm9397-201ENSMUST00000200125 605 ntBASIC25.86■■□□□ 1.73
Kcnu1O54982 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Kcnu1O54982 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Kcnu1O54982 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Kcnu1O54982 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.85■■□□□ 1.73
Kcnu1O54982 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.85■■□□□ 1.73
Kcnu1O54982 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Kcnu1O54982 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
Kcnu1O54982 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.85■■□□□ 1.73
Kcnu1O54982 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Kcnu1O54982 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.84■■□□□ 1.73
Kcnu1O54982 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Kcnu1O54982 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
Kcnu1O54982 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Kcnu1O54982 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.82■■□□□ 1.72
Kcnu1O54982 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Kcnu1O54982 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Kcnu1O54982 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Kcnu1O54982 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.8■■□□□ 1.72
Kcnu1O54982 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.79■■□□□ 1.72
Kcnu1O54982 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.79■■□□□ 1.72
Kcnu1O54982 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Kcnu1O54982 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.77■■□□□ 1.72
Kcnu1O54982 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Kcnu1O54982 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Kcnu1O54982 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Kcnu1O54982 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Kcnu1O54982 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Kcnu1O54982 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.74■■□□□ 1.71
Kcnu1O54982 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Kcnu1O54982 Gm24970-201ENSMUST00000175582 82 ntBASIC25.73■■□□□ 1.71
Kcnu1O54982 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.72■■□□□ 1.71
Kcnu1O54982 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Kcnu1O54982 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.72■■□□□ 1.71
Kcnu1O54982 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Kcnu1O54982 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
Kcnu1O54982 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Kcnu1O54982 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Kcnu1O54982 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Kcnu1O54982 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.68■■□□□ 1.7
Kcnu1O54982 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Kcnu1O54982 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Kcnu1O54982 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Kcnu1O54982 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.66■■□□□ 1.7
Kcnu1O54982 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Kcnu1O54982 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Kcnu1O54982 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
Kcnu1O54982 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
Kcnu1O54982 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms