Protein–RNA interactions for Protein: J3QNT6

Gm5039, Predicted gene 5039, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5039J3QNT6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Gm5039J3QNT6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gm5039J3QNT6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gm5039J3QNT6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.14■■□□□ 1.13
Gm5039J3QNT6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Gm5039J3QNT6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Gm5039J3QNT6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Gm5039J3QNT6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Gm5039J3QNT6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm5039J3QNT6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Gm5039J3QNT6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Gm5039J3QNT6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm5039J3QNT6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.08■■□□□ 1.13
Gm5039J3QNT6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Gm5039J3QNT6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm5039J3QNT6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm5039J3QNT6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm5039J3QNT6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.04■■□□□ 1.12
Gm5039J3QNT6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.04■■□□□ 1.12
Gm5039J3QNT6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Gm5039J3QNT6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm5039J3QNT6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.03■■□□□ 1.12
Gm5039J3QNT6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.03■■□□□ 1.12
Gm5039J3QNT6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.03■■□□□ 1.12
Gm5039J3QNT6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
Gm5039J3QNT6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.03■■□□□ 1.12
Gm5039J3QNT6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Gm5039J3QNT6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Gm5039J3QNT6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm5039J3QNT6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Gm5039J3QNT6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Gm5039J3QNT6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Gm5039J3QNT6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Gm5039J3QNT6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm5039J3QNT6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.99■■□□□ 1.11
Gm5039J3QNT6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm5039J3QNT6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Gm5039J3QNT6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm5039J3QNT6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Gm5039J3QNT6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm5039J3QNT6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Gm5039J3QNT6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Gm5039J3QNT6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Gm5039J3QNT6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm5039J3QNT6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm5039J3QNT6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
Gm5039J3QNT6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm5039J3QNT6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm5039J3QNT6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Gm5039J3QNT6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Gm5039J3QNT6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm5039J3QNT6 Zxda-201ENSMUST00000117281 2621 ntBASIC21.95■■□□□ 1.11
Gm5039J3QNT6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.95■■□□□ 1.1
Gm5039J3QNT6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Gm5039J3QNT6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm5039J3QNT6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Gm5039J3QNT6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.94■■□□□ 1.1
Gm5039J3QNT6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Gm5039J3QNT6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.93■■□□□ 1.1
Gm5039J3QNT6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.93■■□□□ 1.1
Gm5039J3QNT6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm5039J3QNT6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm5039J3QNT6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Gm5039J3QNT6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm5039J3QNT6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm5039J3QNT6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm5039J3QNT6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Gm5039J3QNT6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Gm5039J3QNT6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Gm5039J3QNT6 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.9■■□□□ 1.1
Gm5039J3QNT6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Gm5039J3QNT6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Gm5039J3QNT6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.89■■□□□ 1.09
Gm5039J3QNT6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm5039J3QNT6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.88■■□□□ 1.09
Gm5039J3QNT6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Gm5039J3QNT6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm5039J3QNT6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm5039J3QNT6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm5039J3QNT6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm5039J3QNT6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm5039J3QNT6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Gm5039J3QNT6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Gm5039J3QNT6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Gm5039J3QNT6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.85■■□□□ 1.09
Gm5039J3QNT6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm5039J3QNT6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Gm5039J3QNT6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gm5039J3QNT6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Gm5039J3QNT6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm5039J3QNT6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm5039J3QNT6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm5039J3QNT6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.81■■□□□ 1.08
Gm5039J3QNT6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Gm5039J3QNT6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm5039J3QNT6 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.79■■□□□ 1.08
Gm5039J3QNT6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.79■■□□□ 1.08
Gm5039J3QNT6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Gm5039J3QNT6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Gm5039J3QNT6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms