Protein–RNA interactions for Protein: A6H6A4

Lrriq4, Leucine-rich repeat and IQ domain-containing protein 4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrriq4A6H6A4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Lrriq4A6H6A4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Lrriq4A6H6A4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Lrriq4A6H6A4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Lrriq4A6H6A4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Lrriq4A6H6A4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Lrriq4A6H6A4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Lrriq4A6H6A4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Lrriq4A6H6A4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Lrriq4A6H6A4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Lrriq4A6H6A4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Lrriq4A6H6A4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.57■■□□□ 1.52
Lrriq4A6H6A4 Gm16148-201ENSMUST00000119653 893 ntBASIC24.57■■□□□ 1.52
Lrriq4A6H6A4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Lrriq4A6H6A4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Lrriq4A6H6A4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Lrriq4A6H6A4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Lrriq4A6H6A4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.56■■□□□ 1.52
Lrriq4A6H6A4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
Lrriq4A6H6A4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Lrriq4A6H6A4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Lrriq4A6H6A4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Lrriq4A6H6A4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Lrriq4A6H6A4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Lrriq4A6H6A4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Lrriq4A6H6A4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Lrriq4A6H6A4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Lrriq4A6H6A4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Lrriq4A6H6A4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Lrriq4A6H6A4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Lrriq4A6H6A4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Lrriq4A6H6A4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Lrriq4A6H6A4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Lrriq4A6H6A4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Lrriq4A6H6A4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.5■■□□□ 1.51
Lrriq4A6H6A4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Lrriq4A6H6A4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Lrriq4A6H6A4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Lrriq4A6H6A4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Lrriq4A6H6A4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.49■■□□□ 1.51
Lrriq4A6H6A4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.49■■□□□ 1.51
Lrriq4A6H6A4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Lrriq4A6H6A4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Lrriq4A6H6A4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Lrriq4A6H6A4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Lrriq4A6H6A4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Lrriq4A6H6A4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Lrriq4A6H6A4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Lrriq4A6H6A4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Lrriq4A6H6A4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Lrriq4A6H6A4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Lrriq4A6H6A4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Lrriq4A6H6A4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lrriq4A6H6A4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Lrriq4A6H6A4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.44■■□□□ 1.5
Lrriq4A6H6A4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Lrriq4A6H6A4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lrriq4A6H6A4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Lrriq4A6H6A4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Lrriq4A6H6A4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lrriq4A6H6A4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Lrriq4A6H6A4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
Lrriq4A6H6A4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Lrriq4A6H6A4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Lrriq4A6H6A4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Lrriq4A6H6A4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Lrriq4A6H6A4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Lrriq4A6H6A4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Lrriq4A6H6A4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Lrriq4A6H6A4 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.35■■□□□ 1.49
Lrriq4A6H6A4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lrriq4A6H6A4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.34■■□□□ 1.49
Lrriq4A6H6A4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Lrriq4A6H6A4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.34■■□□□ 1.49
Lrriq4A6H6A4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Lrriq4A6H6A4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Lrriq4A6H6A4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lrriq4A6H6A4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Lrriq4A6H6A4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Lrriq4A6H6A4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lrriq4A6H6A4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lrriq4A6H6A4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Lrriq4A6H6A4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.3■■□□□ 1.48
Lrriq4A6H6A4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Lrriq4A6H6A4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Lrriq4A6H6A4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Lrriq4A6H6A4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.29■■□□□ 1.48
Lrriq4A6H6A4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Lrriq4A6H6A4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Lrriq4A6H6A4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Lrriq4A6H6A4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.27■■□□□ 1.48
Lrriq4A6H6A4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Lrriq4A6H6A4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Lrriq4A6H6A4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Lrriq4A6H6A4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.26■■□□□ 1.47
Lrriq4A6H6A4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Lrriq4A6H6A4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Lrriq4A6H6A4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Lrriq4A6H6A4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Lrriq4A6H6A4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms