Protein–RNA interactions for Protein: A0A140T8R2

Vma21-ps, Vacuolar ATPase assembly integral membrane protein VMA21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21-psA0A140T8R2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vma21-psA0A140T8R2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.29■□□□□ 0.68
Vma21-psA0A140T8R2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vma21-psA0A140T8R2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vma21-psA0A140T8R2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Vma21-psA0A140T8R2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vma21-psA0A140T8R2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vma21-psA0A140T8R2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vma21-psA0A140T8R2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vma21-psA0A140T8R2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vma21-psA0A140T8R2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vma21-psA0A140T8R2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vma21-psA0A140T8R2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vma21-psA0A140T8R2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vma21-psA0A140T8R2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vma21-psA0A140T8R2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vma21-psA0A140T8R2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vma21-psA0A140T8R2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vma21-psA0A140T8R2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Vma21-psA0A140T8R2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vma21-psA0A140T8R2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vma21-psA0A140T8R2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Vma21-psA0A140T8R2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Vma21-psA0A140T8R2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vma21-psA0A140T8R2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vma21-psA0A140T8R2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.2■□□□□ 0.66
Vma21-psA0A140T8R2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vma21-psA0A140T8R2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vma21-psA0A140T8R2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vma21-psA0A140T8R2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vma21-psA0A140T8R2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vma21-psA0A140T8R2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vma21-psA0A140T8R2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vma21-psA0A140T8R2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vma21-psA0A140T8R2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vma21-psA0A140T8R2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vma21-psA0A140T8R2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.17■□□□□ 0.66
Vma21-psA0A140T8R2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vma21-psA0A140T8R2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vma21-psA0A140T8R2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Vma21-psA0A140T8R2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vma21-psA0A140T8R2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vma21-psA0A140T8R2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vma21-psA0A140T8R2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vma21-psA0A140T8R2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vma21-psA0A140T8R2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vma21-psA0A140T8R2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Vma21-psA0A140T8R2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vma21-psA0A140T8R2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vma21-psA0A140T8R2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.13■□□□□ 0.65
Vma21-psA0A140T8R2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vma21-psA0A140T8R2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vma21-psA0A140T8R2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vma21-psA0A140T8R2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.13■□□□□ 0.65
Vma21-psA0A140T8R2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vma21-psA0A140T8R2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vma21-psA0A140T8R2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.13■□□□□ 0.65
Vma21-psA0A140T8R2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vma21-psA0A140T8R2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Vma21-psA0A140T8R2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vma21-psA0A140T8R2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vma21-psA0A140T8R2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Vma21-psA0A140T8R2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vma21-psA0A140T8R2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vma21-psA0A140T8R2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vma21-psA0A140T8R2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Vma21-psA0A140T8R2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vma21-psA0A140T8R2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vma21-psA0A140T8R2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vma21-psA0A140T8R2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.09■□□□□ 0.65
Vma21-psA0A140T8R2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vma21-psA0A140T8R2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vma21-psA0A140T8R2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vma21-psA0A140T8R2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vma21-psA0A140T8R2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Vma21-psA0A140T8R2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Vma21-psA0A140T8R2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Vma21-psA0A140T8R2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vma21-psA0A140T8R2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vma21-psA0A140T8R2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vma21-psA0A140T8R2 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.03■□□□□ 0.64
Vma21-psA0A140T8R2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vma21-psA0A140T8R2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vma21-psA0A140T8R2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vma21-psA0A140T8R2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vma21-psA0A140T8R2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Vma21-psA0A140T8R2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Vma21-psA0A140T8R2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vma21-psA0A140T8R2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vma21-psA0A140T8R2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vma21-psA0A140T8R2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vma21-psA0A140T8R2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vma21-psA0A140T8R2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vma21-psA0A140T8R2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vma21-psA0A140T8R2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vma21-psA0A140T8R2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vma21-psA0A140T8R2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Vma21-psA0A140T8R2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vma21-psA0A140T8R2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vma21-psA0A140T8R2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms