Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Igkv3-3A0A140T8Q0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Igkv3-3A0A140T8Q0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv3-3A0A140T8Q0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv3-3A0A140T8Q0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Igkv3-3A0A140T8Q0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv3-3A0A140T8Q0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Igkv3-3A0A140T8Q0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igkv3-3A0A140T8Q0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igkv3-3A0A140T8Q0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv3-3A0A140T8Q0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Igkv3-3A0A140T8Q0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Igkv3-3A0A140T8Q0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-3A0A140T8Q0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.56□□□□□ -0.08
Igkv3-3A0A140T8Q0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-3A0A140T8Q0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-3A0A140T8Q0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-3A0A140T8Q0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Igkv3-3A0A140T8Q0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Igkv3-3A0A140T8Q0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Igkv3-3A0A140T8Q0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Igkv3-3A0A140T8Q0 Fezf2-202ENSMUST00000224023 1917 ntBASIC14.54□□□□□ -0.08
Igkv3-3A0A140T8Q0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Igkv3-3A0A140T8Q0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Igkv3-3A0A140T8Q0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Igkv3-3A0A140T8Q0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv3-3A0A140T8Q0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv3-3A0A140T8Q0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv3-3A0A140T8Q0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Igkv3-3A0A140T8Q0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Igkv3-3A0A140T8Q0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Igkv3-3A0A140T8Q0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Igkv3-3A0A140T8Q0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Igkv3-3A0A140T8Q0 Amer2-203ENSMUST00000225247 2662 ntBASIC14.51□□□□□ -0.09
Igkv3-3A0A140T8Q0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv3-3A0A140T8Q0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv3-3A0A140T8Q0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv3-3A0A140T8Q0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv3-3A0A140T8Q0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Igkv3-3A0A140T8Q0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Igkv3-3A0A140T8Q0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv3-3A0A140T8Q0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv3-3A0A140T8Q0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Igkv3-3A0A140T8Q0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv3-3A0A140T8Q0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv3-3A0A140T8Q0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv3-3A0A140T8Q0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv3-3A0A140T8Q0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Igkv3-3A0A140T8Q0 Gm25262-201ENSMUST00000174934 133 ntBASIC14.49□□□□□ -0.09
Igkv3-3A0A140T8Q0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Igkv3-3A0A140T8Q0 Gm6345-201ENSMUST00000180378 1691 ntBASIC14.49□□□□□ -0.09
Igkv3-3A0A140T8Q0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv3-3A0A140T8Q0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv3-3A0A140T8Q0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv3-3A0A140T8Q0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv3-3A0A140T8Q0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv3-3A0A140T8Q0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv3-3A0A140T8Q0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC14.46□□□□□ -0.09
Igkv3-3A0A140T8Q0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.46□□□□□ -0.09
Igkv3-3A0A140T8Q0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Igkv3-3A0A140T8Q0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Igkv3-3A0A140T8Q0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv3-3A0A140T8Q0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv3-3A0A140T8Q0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv3-3A0A140T8Q0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv3-3A0A140T8Q0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC14.44□□□□□ -0.1
Igkv3-3A0A140T8Q0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv3-3A0A140T8Q0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv3-3A0A140T8Q0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv3-3A0A140T8Q0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv3-3A0A140T8Q0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv3-3A0A140T8Q0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv3-3A0A140T8Q0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv3-3A0A140T8Q0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv3-3A0A140T8Q0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.42□□□□□ -0.1
Igkv3-3A0A140T8Q0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Igkv3-3A0A140T8Q0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv3-3A0A140T8Q0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv3-3A0A140T8Q0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv3-3A0A140T8Q0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv3-3A0A140T8Q0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv3-3A0A140T8Q0 Gm20634-201ENSMUST00000090779 2956 ntBASIC14.4□□□□□ -0.1
Igkv3-3A0A140T8Q0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-3A0A140T8Q0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Igkv3-3A0A140T8Q0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-3A0A140T8Q0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-3A0A140T8Q0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-3A0A140T8Q0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC14.4□□□□□ -0.1
Igkv3-3A0A140T8Q0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.4□□□□□ -0.1
Igkv3-3A0A140T8Q0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC14.39□□□□□ -0.11
Igkv3-3A0A140T8Q0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Igkv3-3A0A140T8Q0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv3-3A0A140T8Q0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv3-3A0A140T8Q0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv3-3A0A140T8Q0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv3-3A0A140T8Q0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv3-3A0A140T8Q0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv3-3A0A140T8Q0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Igkv3-3A0A140T8Q0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv3-3A0A140T8Q0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms