Protein–RNA interactions for Protein: A0A140T8N7

Igkv6-25, Immunoglobulin kappa chain variable 6-25 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-25A0A140T8N7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Igkv6-25A0A140T8N7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Igkv6-25A0A140T8N7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Igkv6-25A0A140T8N7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Igkv6-25A0A140T8N7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.3■■□□□ 1.32
Igkv6-25A0A140T8N7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Igkv6-25A0A140T8N7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Igkv6-25A0A140T8N7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Igkv6-25A0A140T8N7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.27■■□□□ 1.32
Igkv6-25A0A140T8N7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Igkv6-25A0A140T8N7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.26■■□□□ 1.31
Igkv6-25A0A140T8N7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Igkv6-25A0A140T8N7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Igkv6-25A0A140T8N7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Igkv6-25A0A140T8N7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Igkv6-25A0A140T8N7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Igkv6-25A0A140T8N7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Igkv6-25A0A140T8N7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Igkv6-25A0A140T8N7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.23■■□□□ 1.31
Igkv6-25A0A140T8N7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Igkv6-25A0A140T8N7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Igkv6-25A0A140T8N7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Igkv6-25A0A140T8N7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.21■■□□□ 1.31
Igkv6-25A0A140T8N7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Igkv6-25A0A140T8N7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Igkv6-25A0A140T8N7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Igkv6-25A0A140T8N7 Gm7432-201ENSMUST00000210343 879 ntBASIC23.18■■□□□ 1.3
Igkv6-25A0A140T8N7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Igkv6-25A0A140T8N7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Igkv6-25A0A140T8N7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Igkv6-25A0A140T8N7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Igkv6-25A0A140T8N7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Igkv6-25A0A140T8N7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Igkv6-25A0A140T8N7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.15■■□□□ 1.3
Igkv6-25A0A140T8N7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Igkv6-25A0A140T8N7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Igkv6-25A0A140T8N7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.29
Igkv6-25A0A140T8N7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Igkv6-25A0A140T8N7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Igkv6-25A0A140T8N7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Igkv6-25A0A140T8N7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Igkv6-25A0A140T8N7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Igkv6-25A0A140T8N7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.12■■□□□ 1.29
Igkv6-25A0A140T8N7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Igkv6-25A0A140T8N7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Igkv6-25A0A140T8N7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Igkv6-25A0A140T8N7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Igkv6-25A0A140T8N7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.1■■□□□ 1.29
Igkv6-25A0A140T8N7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Igkv6-25A0A140T8N7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.1■■□□□ 1.29
Igkv6-25A0A140T8N7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.1■■□□□ 1.29
Igkv6-25A0A140T8N7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Igkv6-25A0A140T8N7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.1■■□□□ 1.29
Igkv6-25A0A140T8N7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Igkv6-25A0A140T8N7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Igkv6-25A0A140T8N7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Igkv6-25A0A140T8N7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Igkv6-25A0A140T8N7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.09■■□□□ 1.29
Igkv6-25A0A140T8N7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Igkv6-25A0A140T8N7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.08■■□□□ 1.28
Igkv6-25A0A140T8N7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.07■■□□□ 1.28
Igkv6-25A0A140T8N7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Igkv6-25A0A140T8N7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Igkv6-25A0A140T8N7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Igkv6-25A0A140T8N7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.06■■□□□ 1.28
Igkv6-25A0A140T8N7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Igkv6-25A0A140T8N7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.04■■□□□ 1.28
Igkv6-25A0A140T8N7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Igkv6-25A0A140T8N7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Igkv6-25A0A140T8N7 Gm11599-201ENSMUST00000118720 878 ntBASIC23.03■■□□□ 1.28
Igkv6-25A0A140T8N7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.03■■□□□ 1.28
Igkv6-25A0A140T8N7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.02■■□□□ 1.28
Igkv6-25A0A140T8N7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Igkv6-25A0A140T8N7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Igkv6-25A0A140T8N7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.02■■□□□ 1.28
Igkv6-25A0A140T8N7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Igkv6-25A0A140T8N7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Igkv6-25A0A140T8N7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Igkv6-25A0A140T8N7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.99■■□□□ 1.27
Igkv6-25A0A140T8N7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Igkv6-25A0A140T8N7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Igkv6-25A0A140T8N7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Igkv6-25A0A140T8N7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
Igkv6-25A0A140T8N7 Gm30023-201ENSMUST00000197970 889 ntBASIC22.97■■□□□ 1.27
Igkv6-25A0A140T8N7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Igkv6-25A0A140T8N7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Igkv6-25A0A140T8N7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Igkv6-25A0A140T8N7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Igkv6-25A0A140T8N7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Igkv6-25A0A140T8N7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Igkv6-25A0A140T8N7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Igkv6-25A0A140T8N7 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.94■■□□□ 1.26
Igkv6-25A0A140T8N7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.94■■□□□ 1.26
Igkv6-25A0A140T8N7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Igkv6-25A0A140T8N7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Igkv6-25A0A140T8N7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Igkv6-25A0A140T8N7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Igkv6-25A0A140T8N7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.93■■□□□ 1.26
Igkv6-25A0A140T8N7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Igkv6-25A0A140T8N7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms