Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ccdc194A0A140LIT1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.06■■□□□ 1.44
Ccdc194A0A140LIT1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ccdc194A0A140LIT1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ccdc194A0A140LIT1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ccdc194A0A140LIT1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ccdc194A0A140LIT1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ccdc194A0A140LIT1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ccdc194A0A140LIT1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ccdc194A0A140LIT1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ccdc194A0A140LIT1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.04■■□□□ 1.44
Ccdc194A0A140LIT1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ccdc194A0A140LIT1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ccdc194A0A140LIT1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ccdc194A0A140LIT1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ccdc194A0A140LIT1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.01■■□□□ 1.43
Ccdc194A0A140LIT1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ccdc194A0A140LIT1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ccdc194A0A140LIT1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ccdc194A0A140LIT1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ccdc194A0A140LIT1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Ccdc194A0A140LIT1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ccdc194A0A140LIT1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ccdc194A0A140LIT1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ccdc194A0A140LIT1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ccdc194A0A140LIT1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ccdc194A0A140LIT1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.98■■□□□ 1.43
Ccdc194A0A140LIT1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ccdc194A0A140LIT1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ccdc194A0A140LIT1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ccdc194A0A140LIT1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ccdc194A0A140LIT1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ccdc194A0A140LIT1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ccdc194A0A140LIT1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ccdc194A0A140LIT1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc194A0A140LIT1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ccdc194A0A140LIT1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.92■■□□□ 1.42
Ccdc194A0A140LIT1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ccdc194A0A140LIT1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ccdc194A0A140LIT1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Ccdc194A0A140LIT1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ccdc194A0A140LIT1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Ccdc194A0A140LIT1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ccdc194A0A140LIT1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc194A0A140LIT1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc194A0A140LIT1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.88■■□□□ 1.41
Ccdc194A0A140LIT1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc194A0A140LIT1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc194A0A140LIT1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc194A0A140LIT1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc194A0A140LIT1 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.84■■□□□ 1.41
Ccdc194A0A140LIT1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc194A0A140LIT1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc194A0A140LIT1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc194A0A140LIT1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc194A0A140LIT1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.8■■□□□ 1.4
Ccdc194A0A140LIT1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc194A0A140LIT1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.79■■□□□ 1.4
Ccdc194A0A140LIT1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc194A0A140LIT1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Ccdc194A0A140LIT1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc194A0A140LIT1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc194A0A140LIT1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc194A0A140LIT1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Ccdc194A0A140LIT1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc194A0A140LIT1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc194A0A140LIT1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Ccdc194A0A140LIT1 Zfp131-205ENSMUST00000223812 663 ntBASIC23.76■■□□□ 1.39
Ccdc194A0A140LIT1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
Ccdc194A0A140LIT1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc194A0A140LIT1 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.75■■□□□ 1.39
Ccdc194A0A140LIT1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc194A0A140LIT1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc194A0A140LIT1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc194A0A140LIT1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Ccdc194A0A140LIT1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc194A0A140LIT1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Ccdc194A0A140LIT1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc194A0A140LIT1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.72■■□□□ 1.39
Ccdc194A0A140LIT1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Ccdc194A0A140LIT1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc194A0A140LIT1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ccdc194A0A140LIT1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc194A0A140LIT1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc194A0A140LIT1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.7■■□□□ 1.38
Ccdc194A0A140LIT1 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.69■■□□□ 1.38
Ccdc194A0A140LIT1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc194A0A140LIT1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc194A0A140LIT1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Ccdc194A0A140LIT1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.68■■□□□ 1.38
Ccdc194A0A140LIT1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc194A0A140LIT1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
Ccdc194A0A140LIT1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc194A0A140LIT1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc194A0A140LIT1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc194A0A140LIT1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Ccdc194A0A140LIT1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.65■■□□□ 1.38
Ccdc194A0A140LIT1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.65■■□□□ 1.38
Ccdc194A0A140LIT1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc194A0A140LIT1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms