Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Gm5580A0A0N4SVP8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Gm5580A0A0N4SVP8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Gm5580A0A0N4SVP8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Gm5580A0A0N4SVP8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Gm5580A0A0N4SVP8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Gm5580A0A0N4SVP8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Gm5580A0A0N4SVP8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.49■■□□□ 1.83
Gm5580A0A0N4SVP8 Gm16148-201ENSMUST00000119653 893 ntBASIC26.49■■□□□ 1.83
Gm5580A0A0N4SVP8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Gm5580A0A0N4SVP8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Gm5580A0A0N4SVP8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Gm5580A0A0N4SVP8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
Gm5580A0A0N4SVP8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Gm5580A0A0N4SVP8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.46■■□□□ 1.83
Gm5580A0A0N4SVP8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Gm5580A0A0N4SVP8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Gm5580A0A0N4SVP8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Gm5580A0A0N4SVP8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Gm5580A0A0N4SVP8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Gm5580A0A0N4SVP8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Gm5580A0A0N4SVP8 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.43■■□□□ 1.82
Gm5580A0A0N4SVP8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Gm5580A0A0N4SVP8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
Gm5580A0A0N4SVP8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Gm5580A0A0N4SVP8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Gm5580A0A0N4SVP8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Gm5580A0A0N4SVP8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.41■■□□□ 1.82
Gm5580A0A0N4SVP8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Gm5580A0A0N4SVP8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Gm5580A0A0N4SVP8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Gm5580A0A0N4SVP8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
Gm5580A0A0N4SVP8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Gm5580A0A0N4SVP8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Gm5580A0A0N4SVP8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Gm5580A0A0N4SVP8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.38■■□□□ 1.81
Gm5580A0A0N4SVP8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Gm5580A0A0N4SVP8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Gm5580A0A0N4SVP8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Gm5580A0A0N4SVP8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Gm5580A0A0N4SVP8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Gm5580A0A0N4SVP8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Gm5580A0A0N4SVP8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Gm5580A0A0N4SVP8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Gm5580A0A0N4SVP8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Gm5580A0A0N4SVP8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Gm5580A0A0N4SVP8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Gm5580A0A0N4SVP8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Gm5580A0A0N4SVP8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.32■■□□□ 1.8
Gm5580A0A0N4SVP8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.32■■□□□ 1.8
Gm5580A0A0N4SVP8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Gm5580A0A0N4SVP8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.31■■□□□ 1.8
Gm5580A0A0N4SVP8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Gm5580A0A0N4SVP8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.3■■□□□ 1.8
Gm5580A0A0N4SVP8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
Gm5580A0A0N4SVP8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Gm5580A0A0N4SVP8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Gm5580A0A0N4SVP8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Gm5580A0A0N4SVP8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Gm5580A0A0N4SVP8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Gm5580A0A0N4SVP8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Gm5580A0A0N4SVP8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.26■■□□□ 1.79
Gm5580A0A0N4SVP8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Gm5580A0A0N4SVP8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Gm5580A0A0N4SVP8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Gm5580A0A0N4SVP8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Gm5580A0A0N4SVP8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Gm5580A0A0N4SVP8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Gm5580A0A0N4SVP8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Gm5580A0A0N4SVP8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Gm5580A0A0N4SVP8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.23■■□□□ 1.79
Gm5580A0A0N4SVP8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Gm5580A0A0N4SVP8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Gm5580A0A0N4SVP8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Gm5580A0A0N4SVP8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.21■■□□□ 1.79
Gm5580A0A0N4SVP8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Gm5580A0A0N4SVP8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Gm5580A0A0N4SVP8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Gm5580A0A0N4SVP8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Gm5580A0A0N4SVP8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Gm5580A0A0N4SVP8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Gm5580A0A0N4SVP8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Gm5580A0A0N4SVP8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Gm5580A0A0N4SVP8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Gm5580A0A0N4SVP8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Gm5580A0A0N4SVP8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
Gm5580A0A0N4SVP8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Gm5580A0A0N4SVP8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Gm5580A0A0N4SVP8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Gm5580A0A0N4SVP8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Gm5580A0A0N4SVP8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Gm5580A0A0N4SVP8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Gm5580A0A0N4SVP8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Gm5580A0A0N4SVP8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Gm5580A0A0N4SVP8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Gm5580A0A0N4SVP8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Gm5580A0A0N4SVP8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Gm5580A0A0N4SVP8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Gm5580A0A0N4SVP8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Gm5580A0A0N4SVP8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms