Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.49■□□□□ 0.71
Trav13n-4A0A0G2JG01 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav13n-4A0A0G2JG01 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav13n-4A0A0G2JG01 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav13n-4A0A0G2JG01 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav13n-4A0A0G2JG01 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav13n-4A0A0G2JG01 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav13n-4A0A0G2JG01 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav13n-4A0A0G2JG01 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.46■□□□□ 0.71
Trav13n-4A0A0G2JG01 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trav13n-4A0A0G2JG01 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.46■□□□□ 0.71
Trav13n-4A0A0G2JG01 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav13n-4A0A0G2JG01 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.45■□□□□ 0.7
Trav13n-4A0A0G2JG01 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav13n-4A0A0G2JG01 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav13n-4A0A0G2JG01 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav13n-4A0A0G2JG01 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav13n-4A0A0G2JG01 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav13n-4A0A0G2JG01 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav13n-4A0A0G2JG01 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav13n-4A0A0G2JG01 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav13n-4A0A0G2JG01 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Trav13n-4A0A0G2JG01 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.42■□□□□ 0.7
Trav13n-4A0A0G2JG01 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav13n-4A0A0G2JG01 Gm6821-201ENSMUST00000107540 542 ntBASIC19.41■□□□□ 0.7
Trav13n-4A0A0G2JG01 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trav13n-4A0A0G2JG01 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.41■□□□□ 0.7
Trav13n-4A0A0G2JG01 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.4■□□□□ 0.7
Trav13n-4A0A0G2JG01 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav13n-4A0A0G2JG01 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.39■□□□□ 0.69
Trav13n-4A0A0G2JG01 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav13n-4A0A0G2JG01 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav13n-4A0A0G2JG01 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav13n-4A0A0G2JG01 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trav13n-4A0A0G2JG01 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav13n-4A0A0G2JG01 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav13n-4A0A0G2JG01 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav13n-4A0A0G2JG01 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav13n-4A0A0G2JG01 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav13n-4A0A0G2JG01 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav13n-4A0A0G2JG01 Gm8503-201ENSMUST00000118131 455 ntBASIC19.36■□□□□ 0.69
Trav13n-4A0A0G2JG01 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav13n-4A0A0G2JG01 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav13n-4A0A0G2JG01 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.35■□□□□ 0.69
Trav13n-4A0A0G2JG01 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.34■□□□□ 0.69
Trav13n-4A0A0G2JG01 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav13n-4A0A0G2JG01 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav13n-4A0A0G2JG01 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav13n-4A0A0G2JG01 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav13n-4A0A0G2JG01 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav13n-4A0A0G2JG01 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav13n-4A0A0G2JG01 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav13n-4A0A0G2JG01 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trav13n-4A0A0G2JG01 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.31■□□□□ 0.68
Trav13n-4A0A0G2JG01 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav13n-4A0A0G2JG01 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trav13n-4A0A0G2JG01 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav13n-4A0A0G2JG01 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.3■□□□□ 0.68
Trav13n-4A0A0G2JG01 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav13n-4A0A0G2JG01 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav13n-4A0A0G2JG01 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav13n-4A0A0G2JG01 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav13n-4A0A0G2JG01 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Trav13n-4A0A0G2JG01 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav13n-4A0A0G2JG01 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.28■□□□□ 0.68
Trav13n-4A0A0G2JG01 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trav13n-4A0A0G2JG01 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav13n-4A0A0G2JG01 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Trav13n-4A0A0G2JG01 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav13n-4A0A0G2JG01 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav13n-4A0A0G2JG01 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav13n-4A0A0G2JG01 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav13n-4A0A0G2JG01 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav13n-4A0A0G2JG01 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.24■□□□□ 0.67
Trav13n-4A0A0G2JG01 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav13n-4A0A0G2JG01 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav13n-4A0A0G2JG01 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav13n-4A0A0G2JG01 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav13n-4A0A0G2JG01 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav13n-4A0A0G2JG01 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav13n-4A0A0G2JG01 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Trav13n-4A0A0G2JG01 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav13n-4A0A0G2JG01 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trav13n-4A0A0G2JG01 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav13n-4A0A0G2JG01 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav13n-4A0A0G2JG01 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav13n-4A0A0G2JG01 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav13n-4A0A0G2JG01 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav13n-4A0A0G2JG01 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav13n-4A0A0G2JG01 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav13n-4A0A0G2JG01 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav13n-4A0A0G2JG01 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.2■□□□□ 0.66
Trav13n-4A0A0G2JG01 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav13n-4A0A0G2JG01 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trav13n-4A0A0G2JG01 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.19■□□□□ 0.66
Trav13n-4A0A0G2JG01 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav13n-4A0A0G2JG01 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Trav13n-4A0A0G2JG01 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav13n-4A0A0G2JG01 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.18■□□□□ 0.66
Trav13n-4A0A0G2JG01 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms