Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.97■□□□□ 0.63
Trav7-5A0A0G2JFX6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trav7-5A0A0G2JFX6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav7-5A0A0G2JFX6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav7-5A0A0G2JFX6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav7-5A0A0G2JFX6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav7-5A0A0G2JFX6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav7-5A0A0G2JFX6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav7-5A0A0G2JFX6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.93■□□□□ 0.62
Trav7-5A0A0G2JFX6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav7-5A0A0G2JFX6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav7-5A0A0G2JFX6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav7-5A0A0G2JFX6 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.91■□□□□ 0.62
Trav7-5A0A0G2JFX6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav7-5A0A0G2JFX6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav7-5A0A0G2JFX6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav7-5A0A0G2JFX6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav7-5A0A0G2JFX6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav7-5A0A0G2JFX6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trav7-5A0A0G2JFX6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav7-5A0A0G2JFX6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav7-5A0A0G2JFX6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav7-5A0A0G2JFX6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav7-5A0A0G2JFX6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav7-5A0A0G2JFX6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav7-5A0A0G2JFX6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav7-5A0A0G2JFX6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav7-5A0A0G2JFX6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav7-5A0A0G2JFX6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.88■□□□□ 0.61
Trav7-5A0A0G2JFX6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav7-5A0A0G2JFX6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.88■□□□□ 0.61
Trav7-5A0A0G2JFX6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.87■□□□□ 0.61
Trav7-5A0A0G2JFX6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav7-5A0A0G2JFX6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav7-5A0A0G2JFX6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trav7-5A0A0G2JFX6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.86■□□□□ 0.61
Trav7-5A0A0G2JFX6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav7-5A0A0G2JFX6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav7-5A0A0G2JFX6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav7-5A0A0G2JFX6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav7-5A0A0G2JFX6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav7-5A0A0G2JFX6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav7-5A0A0G2JFX6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav7-5A0A0G2JFX6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav7-5A0A0G2JFX6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav7-5A0A0G2JFX6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav7-5A0A0G2JFX6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav7-5A0A0G2JFX6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav7-5A0A0G2JFX6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.83■□□□□ 0.6
Trav7-5A0A0G2JFX6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav7-5A0A0G2JFX6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.83■□□□□ 0.6
Trav7-5A0A0G2JFX6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav7-5A0A0G2JFX6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav7-5A0A0G2JFX6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav7-5A0A0G2JFX6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7-5A0A0G2JFX6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7-5A0A0G2JFX6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7-5A0A0G2JFX6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7-5A0A0G2JFX6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7-5A0A0G2JFX6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7-5A0A0G2JFX6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7-5A0A0G2JFX6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7-5A0A0G2JFX6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7-5A0A0G2JFX6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7-5A0A0G2JFX6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7-5A0A0G2JFX6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Trav7-5A0A0G2JFX6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav7-5A0A0G2JFX6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Trav7-5A0A0G2JFX6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav7-5A0A0G2JFX6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.78■□□□□ 0.6
Trav7-5A0A0G2JFX6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav7-5A0A0G2JFX6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trav7-5A0A0G2JFX6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav7-5A0A0G2JFX6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Trav7-5A0A0G2JFX6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav7-5A0A0G2JFX6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav7-5A0A0G2JFX6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav7-5A0A0G2JFX6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trav7-5A0A0G2JFX6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav7-5A0A0G2JFX6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav7-5A0A0G2JFX6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav7-5A0A0G2JFX6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav7-5A0A0G2JFX6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav7-5A0A0G2JFX6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav7-5A0A0G2JFX6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trav7-5A0A0G2JFX6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav7-5A0A0G2JFX6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav7-5A0A0G2JFX6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Trav7-5A0A0G2JFX6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav7-5A0A0G2JFX6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav7-5A0A0G2JFX6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav7-5A0A0G2JFX6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trav7-5A0A0G2JFX6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Trav7-5A0A0G2JFX6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav7-5A0A0G2JFX6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav7-5A0A0G2JFX6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav7-5A0A0G2JFX6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav7-5A0A0G2JFX6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav7-5A0A0G2JFX6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav7-5A0A0G2JFX6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms