Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.97■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.96■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv13-3A0A0B4J1H2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv13-3A0A0B4J1H2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv13-3A0A0B4J1H2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv13-3A0A0B4J1H2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv13-3A0A0B4J1H2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv13-3A0A0B4J1H2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Trbv13-3A0A0B4J1H2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trbv13-3A0A0B4J1H2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trbv13-3A0A0B4J1H2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv13-3A0A0B4J1H2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv13-3A0A0B4J1H2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv13-3A0A0B4J1H2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv13-3A0A0B4J1H2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Trbv13-3A0A0B4J1H2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.86■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.83■□□□□ 0.61
Trbv13-3A0A0B4J1H2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.82■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv13-3A0A0B4J1H2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.77■□□□□ 0.6
Trbv13-3A0A0B4J1H2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv13-3A0A0B4J1H2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.75■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.74■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv13-3A0A0B4J1H2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv13-3A0A0B4J1H2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv13-3A0A0B4J1H2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.71■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv13-3A0A0B4J1H2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv13-3A0A0B4J1H2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv13-3A0A0B4J1H2 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.7■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.67■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms