Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Gm16148-201ENSMUST00000119653 893 ntBASIC16.2■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-56A0A0A6YXG2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-56A0A0A6YXG2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC16.16■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16.16■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-56A0A0A6YXG2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-56A0A0A6YXG2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-56A0A0A6YXG2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Ighv1-56A0A0A6YXG2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC16.12■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-56A0A0A6YXG2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-56A0A0A6YXG2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-56A0A0A6YXG2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.08■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.06■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.05■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-56A0A0A6YXG2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC16.02■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-56A0A0A6YXG2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16■□□□□ 0.15
Ighv1-56A0A0A6YXG2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-56A0A0A6YXG2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms