Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.97■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.93■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-23A0A0A6YVW3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-23A0A0A6YVW3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-23A0A0A6YVW3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.89■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-23A0A0A6YVW3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Gm16148-201ENSMUST00000119653 893 ntBASIC17.84■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv1-23A0A0A6YVW3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
Ighv1-23A0A0A6YVW3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.82■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.81■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.77■□□□□ 0.44
Ighv1-23A0A0A6YVW3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-23A0A0A6YVW3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-23A0A0A6YVW3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-23A0A0A6YVW3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-23A0A0A6YVW3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.76■□□□□ 0.43
Ighv1-23A0A0A6YVW3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-23A0A0A6YVW3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-23A0A0A6YVW3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-23A0A0A6YVW3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-23A0A0A6YVW3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-23A0A0A6YVW3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-23A0A0A6YVW3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-23A0A0A6YVW3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-23A0A0A6YVW3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-23A0A0A6YVW3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.73■□□□□ 0.43
Ighv1-23A0A0A6YVW3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-23A0A0A6YVW3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-23A0A0A6YVW3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-23A0A0A6YVW3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Ighv1-23A0A0A6YVW3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-23A0A0A6YVW3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-23A0A0A6YVW3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-23A0A0A6YVW3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-23A0A0A6YVW3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms