Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6n-6A0A075B6B2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6n-6A0A075B6B2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6n-6A0A075B6B2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.79■□□□□ 0.44
Trav6n-6A0A075B6B2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trav6n-6A0A075B6B2 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.78■□□□□ 0.44
Trav6n-6A0A075B6B2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6n-6A0A075B6B2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6n-6A0A075B6B2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6n-6A0A075B6B2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6n-6A0A075B6B2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6n-6A0A075B6B2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6n-6A0A075B6B2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.77■□□□□ 0.44
Trav6n-6A0A075B6B2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trav6n-6A0A075B6B2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6n-6A0A075B6B2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6n-6A0A075B6B2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6n-6A0A075B6B2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Trav6n-6A0A075B6B2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6n-6A0A075B6B2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6n-6A0A075B6B2 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.74■□□□□ 0.43
Trav6n-6A0A075B6B2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6n-6A0A075B6B2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6n-6A0A075B6B2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6n-6A0A075B6B2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6n-6A0A075B6B2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6n-6A0A075B6B2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6n-6A0A075B6B2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6n-6A0A075B6B2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trav6n-6A0A075B6B2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6n-6A0A075B6B2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav6n-6A0A075B6B2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.72■□□□□ 0.43
Trav6n-6A0A075B6B2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav6n-6A0A075B6B2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6n-6A0A075B6B2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6n-6A0A075B6B2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav6n-6A0A075B6B2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6n-6A0A075B6B2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Trav6n-6A0A075B6B2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trav6n-6A0A075B6B2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6n-6A0A075B6B2 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.69■□□□□ 0.42
Trav6n-6A0A075B6B2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6n-6A0A075B6B2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6n-6A0A075B6B2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav6n-6A0A075B6B2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6n-6A0A075B6B2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6n-6A0A075B6B2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6n-6A0A075B6B2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6n-6A0A075B6B2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trav6n-6A0A075B6B2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6n-6A0A075B6B2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6n-6A0A075B6B2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6n-6A0A075B6B2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trav6n-6A0A075B6B2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Trav6n-6A0A075B6B2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6n-6A0A075B6B2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav6n-6A0A075B6B2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6n-6A0A075B6B2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Trav6n-6A0A075B6B2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6n-6A0A075B6B2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6n-6A0A075B6B2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6n-6A0A075B6B2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav6n-6A0A075B6B2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6n-6A0A075B6B2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Trav6n-6A0A075B6B2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.65■□□□□ 0.42
Trav6n-6A0A075B6B2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trav6n-6A0A075B6B2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Trav6n-6A0A075B6B2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6n-6A0A075B6B2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6n-6A0A075B6B2 Zfp131-205ENSMUST00000223812 663 ntBASIC17.65■□□□□ 0.42
Trav6n-6A0A075B6B2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6n-6A0A075B6B2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Trav6n-6A0A075B6B2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6n-6A0A075B6B2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6n-6A0A075B6B2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6n-6A0A075B6B2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6n-6A0A075B6B2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6n-6A0A075B6B2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6n-6A0A075B6B2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6n-6A0A075B6B2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6n-6A0A075B6B2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trav6n-6A0A075B6B2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6n-6A0A075B6B2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6n-6A0A075B6B2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav6n-6A0A075B6B2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.62■□□□□ 0.41
Trav6n-6A0A075B6B2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6n-6A0A075B6B2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6n-6A0A075B6B2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trav6n-6A0A075B6B2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6n-6A0A075B6B2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6n-6A0A075B6B2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6n-6A0A075B6B2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6n-6A0A075B6B2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6n-6A0A075B6B2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6n-6A0A075B6B2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav6n-6A0A075B6B2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav6n-6A0A075B6B2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav6n-6A0A075B6B2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6n-6A0A075B6B2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6n-6A0A075B6B2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms