Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trav9d-1A0A075B699 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav9d-1A0A075B699 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav9d-1A0A075B699 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav9d-1A0A075B699 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav9d-1A0A075B699 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav9d-1A0A075B699 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav9d-1A0A075B699 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav9d-1A0A075B699 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.61■□□□□ 0.57
Trav9d-1A0A075B699 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav9d-1A0A075B699 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav9d-1A0A075B699 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav9d-1A0A075B699 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav9d-1A0A075B699 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav9d-1A0A075B699 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trav9d-1A0A075B699 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav9d-1A0A075B699 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav9d-1A0A075B699 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav9d-1A0A075B699 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.59■□□□□ 0.57
Trav9d-1A0A075B699 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trav9d-1A0A075B699 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trav9d-1A0A075B699 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav9d-1A0A075B699 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Trav9d-1A0A075B699 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav9d-1A0A075B699 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Trav9d-1A0A075B699 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav9d-1A0A075B699 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav9d-1A0A075B699 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav9d-1A0A075B699 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav9d-1A0A075B699 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav9d-1A0A075B699 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.54■□□□□ 0.56
Trav9d-1A0A075B699 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav9d-1A0A075B699 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav9d-1A0A075B699 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav9d-1A0A075B699 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav9d-1A0A075B699 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav9d-1A0A075B699 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav9d-1A0A075B699 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav9d-1A0A075B699 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav9d-1A0A075B699 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trav9d-1A0A075B699 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav9d-1A0A075B699 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav9d-1A0A075B699 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav9d-1A0A075B699 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav9d-1A0A075B699 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav9d-1A0A075B699 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav9d-1A0A075B699 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav9d-1A0A075B699 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.51■□□□□ 0.55
Trav9d-1A0A075B699 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.51■□□□□ 0.55
Trav9d-1A0A075B699 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav9d-1A0A075B699 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav9d-1A0A075B699 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.5■□□□□ 0.55
Trav9d-1A0A075B699 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.49■□□□□ 0.55
Trav9d-1A0A075B699 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav9d-1A0A075B699 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav9d-1A0A075B699 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav9d-1A0A075B699 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.48■□□□□ 0.55
Trav9d-1A0A075B699 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav9d-1A0A075B699 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav9d-1A0A075B699 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav9d-1A0A075B699 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trav9d-1A0A075B699 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trav9d-1A0A075B699 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trav9d-1A0A075B699 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav9d-1A0A075B699 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav9d-1A0A075B699 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav9d-1A0A075B699 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav9d-1A0A075B699 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav9d-1A0A075B699 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav9d-1A0A075B699 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
Trav9d-1A0A075B699 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav9d-1A0A075B699 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trav9d-1A0A075B699 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav9d-1A0A075B699 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.42■□□□□ 0.54
Trav9d-1A0A075B699 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav9d-1A0A075B699 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trav9d-1A0A075B699 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav9d-1A0A075B699 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trav9d-1A0A075B699 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav9d-1A0A075B699 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav9d-1A0A075B699 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav9d-1A0A075B699 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav9d-1A0A075B699 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav9d-1A0A075B699 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav9d-1A0A075B699 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav9d-1A0A075B699 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav9d-1A0A075B699 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav9d-1A0A075B699 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav9d-1A0A075B699 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav9d-1A0A075B699 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav9d-1A0A075B699 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav9d-1A0A075B699 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav9d-1A0A075B699 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Trav9d-1A0A075B699 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav9d-1A0A075B699 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav9d-1A0A075B699 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav9d-1A0A075B699 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav9d-1A0A075B699 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav9d-1A0A075B699 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trav9d-1A0A075B699 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms