Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9d-3A0A075B695 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9d-3A0A075B695 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9d-3A0A075B695 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9d-3A0A075B695 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav9d-3A0A075B695 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9d-3A0A075B695 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9d-3A0A075B695 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9d-3A0A075B695 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9d-3A0A075B695 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9d-3A0A075B695 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.17■□□□□ 0.34
Trav9d-3A0A075B695 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9d-3A0A075B695 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9d-3A0A075B695 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9d-3A0A075B695 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9d-3A0A075B695 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9d-3A0A075B695 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.15■□□□□ 0.34
Trav9d-3A0A075B695 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9d-3A0A075B695 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.14■□□□□ 0.33
Trav9d-3A0A075B695 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.14■□□□□ 0.33
Trav9d-3A0A075B695 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9d-3A0A075B695 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9d-3A0A075B695 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.13■□□□□ 0.33
Trav9d-3A0A075B695 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9d-3A0A075B695 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.12■□□□□ 0.33
Trav9d-3A0A075B695 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.12■□□□□ 0.33
Trav9d-3A0A075B695 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav9d-3A0A075B695 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9d-3A0A075B695 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9d-3A0A075B695 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9d-3A0A075B695 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9d-3A0A075B695 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trav9d-3A0A075B695 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9d-3A0A075B695 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9d-3A0A075B695 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9d-3A0A075B695 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.1■□□□□ 0.33
Trav9d-3A0A075B695 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Trav9d-3A0A075B695 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.09■□□□□ 0.33
Trav9d-3A0A075B695 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav9d-3A0A075B695 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav9d-3A0A075B695 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav9d-3A0A075B695 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav9d-3A0A075B695 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.08■□□□□ 0.32
Trav9d-3A0A075B695 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav9d-3A0A075B695 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav9d-3A0A075B695 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav9d-3A0A075B695 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9d-3A0A075B695 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.07■□□□□ 0.32
Trav9d-3A0A075B695 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9d-3A0A075B695 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9d-3A0A075B695 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9d-3A0A075B695 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9d-3A0A075B695 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9d-3A0A075B695 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9d-3A0A075B695 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.06■□□□□ 0.32
Trav9d-3A0A075B695 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9d-3A0A075B695 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav9d-3A0A075B695 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav9d-3A0A075B695 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav9d-3A0A075B695 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9d-3A0A075B695 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9d-3A0A075B695 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9d-3A0A075B695 Gm9397-201ENSMUST00000200125 605 ntBASIC17.04■□□□□ 0.32
Trav9d-3A0A075B695 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9d-3A0A075B695 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav9d-3A0A075B695 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9d-3A0A075B695 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9d-3A0A075B695 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9d-3A0A075B695 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9d-3A0A075B695 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9d-3A0A075B695 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.02■□□□□ 0.32
Trav9d-3A0A075B695 Gm45855-201ENSMUST00000212546 880 ntBASIC17.02■□□□□ 0.32
Trav9d-3A0A075B695 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav9d-3A0A075B695 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav9d-3A0A075B695 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Trav9d-3A0A075B695 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9d-3A0A075B695 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trav9d-3A0A075B695 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.01■□□□□ 0.31
Trav9d-3A0A075B695 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9d-3A0A075B695 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9d-3A0A075B695 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9d-3A0A075B695 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Trav9d-3A0A075B695 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9d-3A0A075B695 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Trav9d-3A0A075B695 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav9d-3A0A075B695 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav9d-3A0A075B695 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9d-3A0A075B695 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Trav9d-3A0A075B695 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav9d-3A0A075B695 Gm24970-201ENSMUST00000175582 82 ntBASIC16.96■□□□□ 0.31
Trav9d-3A0A075B695 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav9d-3A0A075B695 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav9d-3A0A075B695 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trav9d-3A0A075B695 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9d-3A0A075B695 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9d-3A0A075B695 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9d-3A0A075B695 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.95■□□□□ 0.3
Trav9d-3A0A075B695 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9d-3A0A075B695 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9d-3A0A075B695 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms