Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav16d-dv11A0A075B617 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav16d-dv11A0A075B617 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav16d-dv11A0A075B617 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav16d-dv11A0A075B617 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav16d-dv11A0A075B617 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav16d-dv11A0A075B617 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav16d-dv11A0A075B617 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.72■□□□□ 0.43
Trav16d-dv11A0A075B617 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav16d-dv11A0A075B617 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav16d-dv11A0A075B617 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav16d-dv11A0A075B617 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav16d-dv11A0A075B617 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav16d-dv11A0A075B617 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav16d-dv11A0A075B617 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Trav16d-dv11A0A075B617 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16d-dv11A0A075B617 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16d-dv11A0A075B617 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trav16d-dv11A0A075B617 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16d-dv11A0A075B617 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16d-dv11A0A075B617 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16d-dv11A0A075B617 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16d-dv11A0A075B617 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav16d-dv11A0A075B617 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
Trav16d-dv11A0A075B617 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.69■□□□□ 0.42
Trav16d-dv11A0A075B617 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav16d-dv11A0A075B617 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav16d-dv11A0A075B617 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav16d-dv11A0A075B617 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav16d-dv11A0A075B617 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.65■□□□□ 0.42
Trav16d-dv11A0A075B617 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav16d-dv11A0A075B617 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav16d-dv11A0A075B617 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav16d-dv11A0A075B617 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav16d-dv11A0A075B617 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav16d-dv11A0A075B617 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav16d-dv11A0A075B617 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav16d-dv11A0A075B617 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.61■□□□□ 0.41
Trav16d-dv11A0A075B617 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trav16d-dv11A0A075B617 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trav16d-dv11A0A075B617 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav16d-dv11A0A075B617 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav16d-dv11A0A075B617 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trav16d-dv11A0A075B617 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav16d-dv11A0A075B617 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Trav16d-dv11A0A075B617 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Trav16d-dv11A0A075B617 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav16d-dv11A0A075B617 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav16d-dv11A0A075B617 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav16d-dv11A0A075B617 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.56■□□□□ 0.4
Trav16d-dv11A0A075B617 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav16d-dv11A0A075B617 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trav16d-dv11A0A075B617 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav16d-dv11A0A075B617 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav16d-dv11A0A075B617 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav16d-dv11A0A075B617 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trav16d-dv11A0A075B617 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav16d-dv11A0A075B617 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav16d-dv11A0A075B617 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.54■□□□□ 0.4
Trav16d-dv11A0A075B617 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav16d-dv11A0A075B617 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Trav16d-dv11A0A075B617 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav16d-dv11A0A075B617 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav16d-dv11A0A075B617 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav16d-dv11A0A075B617 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav16d-dv11A0A075B617 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav16d-dv11A0A075B617 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav16d-dv11A0A075B617 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav16d-dv11A0A075B617 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav16d-dv11A0A075B617 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.51■□□□□ 0.39
Trav16d-dv11A0A075B617 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav16d-dv11A0A075B617 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav16d-dv11A0A075B617 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.51■□□□□ 0.39
Trav16d-dv11A0A075B617 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trav16d-dv11A0A075B617 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Trav16d-dv11A0A075B617 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav16d-dv11A0A075B617 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav16d-dv11A0A075B617 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav16d-dv11A0A075B617 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav16d-dv11A0A075B617 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav16d-dv11A0A075B617 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trav16d-dv11A0A075B617 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Trav16d-dv11A0A075B617 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav16d-dv11A0A075B617 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav16d-dv11A0A075B617 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav16d-dv11A0A075B617 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav16d-dv11A0A075B617 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav16d-dv11A0A075B617 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav16d-dv11A0A075B617 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav16d-dv11A0A075B617 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Trav16d-dv11A0A075B617 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav16d-dv11A0A075B617 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav16d-dv11A0A075B617 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav16d-dv11A0A075B617 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav16d-dv11A0A075B617 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav16d-dv11A0A075B617 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav16d-dv11A0A075B617 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav16d-dv11A0A075B617 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav16d-dv11A0A075B617 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav16d-dv11A0A075B617 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms