Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SynbQ8BI41 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SynbQ8BI41 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SynbQ8BI41 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.96■□□□□ 0.31
SynbQ8BI41 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SynbQ8BI41 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SynbQ8BI41 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.96■□□□□ 0.31
SynbQ8BI41 Mir5122-201ENSMUST00000175004 89 ntBASIC16.96■□□□□ 0.31
SynbQ8BI41 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SynbQ8BI41 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SynbQ8BI41 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.96■□□□□ 0.31
SynbQ8BI41 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SynbQ8BI41 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SynbQ8BI41 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SynbQ8BI41 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SynbQ8BI41 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SynbQ8BI41 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SynbQ8BI41 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SynbQ8BI41 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SynbQ8BI41 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SynbQ8BI41 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SynbQ8BI41 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.95■□□□□ 0.3
SynbQ8BI41 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.95■□□□□ 0.3
SynbQ8BI41 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SynbQ8BI41 Gm11927-201ENSMUST00000118472 759 ntBASIC16.95■□□□□ 0.3
SynbQ8BI41 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SynbQ8BI41 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynbQ8BI41 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.95■□□□□ 0.3
SynbQ8BI41 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynbQ8BI41 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynbQ8BI41 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynbQ8BI41 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SynbQ8BI41 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynbQ8BI41 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynbQ8BI41 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynbQ8BI41 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SynbQ8BI41 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynbQ8BI41 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynbQ8BI41 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SynbQ8BI41 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynbQ8BI41 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.95■□□□□ 0.3
SynbQ8BI41 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynbQ8BI41 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SynbQ8BI41 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SynbQ8BI41 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SynbQ8BI41 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SynbQ8BI41 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.94■□□□□ 0.3
SynbQ8BI41 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.94■□□□□ 0.3
SynbQ8BI41 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SynbQ8BI41 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.94■□□□□ 0.3
SynbQ8BI41 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SynbQ8BI41 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.94■□□□□ 0.3
SynbQ8BI41 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SynbQ8BI41 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SynbQ8BI41 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SynbQ8BI41 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.93■□□□□ 0.3
SynbQ8BI41 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SynbQ8BI41 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SynbQ8BI41 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SynbQ8BI41 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.93■□□□□ 0.3
SynbQ8BI41 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.93■□□□□ 0.3
SynbQ8BI41 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SynbQ8BI41 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SynbQ8BI41 Gm9987-201ENSMUST00000069768 567 ntBASIC16.93■□□□□ 0.3
SynbQ8BI41 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SynbQ8BI41 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SynbQ8BI41 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SynbQ8BI41 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SynbQ8BI41 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SynbQ8BI41 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SynbQ8BI41 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SynbQ8BI41 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SynbQ8BI41 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SynbQ8BI41 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SynbQ8BI41 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SynbQ8BI41 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SynbQ8BI41 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SynbQ8BI41 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SynbQ8BI41 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SynbQ8BI41 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SynbQ8BI41 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SynbQ8BI41 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.92■□□□□ 0.3
SynbQ8BI41 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SynbQ8BI41 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SynbQ8BI41 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SynbQ8BI41 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SynbQ8BI41 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SynbQ8BI41 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SynbQ8BI41 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SynbQ8BI41 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SynbQ8BI41 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SynbQ8BI41 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SynbQ8BI41 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SynbQ8BI41 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SynbQ8BI41 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SynbQ8BI41 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SynbQ8BI41 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SynbQ8BI41 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SynbQ8BI41 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SynbQ8BI41 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms