Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Col10a1Q05306 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col10a1Q05306 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col10a1Q05306 Gm20760-201ENSMUST00000179197 648 ntBASIC16.42■□□□□ 0.22
Col10a1Q05306 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col10a1Q05306 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Col10a1Q05306 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col10a1Q05306 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col10a1Q05306 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col10a1Q05306 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col10a1Q05306 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col10a1Q05306 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Col10a1Q05306 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col10a1Q05306 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Col10a1Q05306 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col10a1Q05306 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col10a1Q05306 Gm13158-201ENSMUST00000122007 736 ntBASIC16.41■□□□□ 0.22
Col10a1Q05306 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col10a1Q05306 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Col10a1Q05306 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.41■□□□□ 0.22
Col10a1Q05306 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.41■□□□□ 0.22
Col10a1Q05306 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.41■□□□□ 0.22
Col10a1Q05306 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col10a1Q05306 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col10a1Q05306 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col10a1Q05306 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col10a1Q05306 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col10a1Q05306 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col10a1Q05306 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col10a1Q05306 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col10a1Q05306 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col10a1Q05306 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col10a1Q05306 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col10a1Q05306 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col10a1Q05306 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col10a1Q05306 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col10a1Q05306 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col10a1Q05306 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col10a1Q05306 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.4■□□□□ 0.22
Col10a1Q05306 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col10a1Q05306 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col10a1Q05306 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col10a1Q05306 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Col10a1Q05306 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.4■□□□□ 0.22
Col10a1Q05306 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col10a1Q05306 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col10a1Q05306 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.4■□□□□ 0.22
Col10a1Q05306 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col10a1Q05306 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.4■□□□□ 0.22
Col10a1Q05306 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.4■□□□□ 0.22
Col10a1Q05306 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col10a1Q05306 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Col10a1Q05306 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Col10a1Q05306 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col10a1Q05306 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.39■□□□□ 0.21
Col10a1Q05306 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col10a1Q05306 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Col10a1Q05306 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col10a1Q05306 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col10a1Q05306 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col10a1Q05306 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col10a1Q05306 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col10a1Q05306 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Col10a1Q05306 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col10a1Q05306 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Col10a1Q05306 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col10a1Q05306 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col10a1Q05306 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col10a1Q05306 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.39■□□□□ 0.21
Col10a1Q05306 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col10a1Q05306 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col10a1Q05306 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col10a1Q05306 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col10a1Q05306 Grk6-206ENSMUST00000224995 2971 ntBASIC16.38■□□□□ 0.21
Col10a1Q05306 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col10a1Q05306 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col10a1Q05306 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col10a1Q05306 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col10a1Q05306 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col10a1Q05306 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col10a1Q05306 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col10a1Q05306 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.38■□□□□ 0.21
Col10a1Q05306 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col10a1Q05306 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col10a1Q05306 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.38■□□□□ 0.21
Col10a1Q05306 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col10a1Q05306 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Col10a1Q05306 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col10a1Q05306 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col10a1Q05306 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col10a1Q05306 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col10a1Q05306 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Col10a1Q05306 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col10a1Q05306 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col10a1Q05306 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col10a1Q05306 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col10a1Q05306 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col10a1Q05306 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col10a1Q05306 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Col10a1Q05306 Gm10138-203ENSMUST00000206952 366 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms