Protein–RNA interactions for Protein: A0A087WSH0

1700031M16Rik, RIKEN cDNA 1700031M16 gene, mousemouse

Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700031M16RikA0A087WSH0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
1700031M16RikA0A087WSH0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
1700031M16RikA0A087WSH0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
1700031M16RikA0A087WSH0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
1700031M16RikA0A087WSH0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
1700031M16RikA0A087WSH0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
1700031M16RikA0A087WSH0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
1700031M16RikA0A087WSH0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
1700031M16RikA0A087WSH0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
1700031M16RikA0A087WSH0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
1700031M16RikA0A087WSH0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
1700031M16RikA0A087WSH0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
1700031M16RikA0A087WSH0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
1700031M16RikA0A087WSH0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
1700031M16RikA0A087WSH0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
1700031M16RikA0A087WSH0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.78■□□□□ 0.6
1700031M16RikA0A087WSH0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.78■□□□□ 0.6
1700031M16RikA0A087WSH0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
1700031M16RikA0A087WSH0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
1700031M16RikA0A087WSH0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
1700031M16RikA0A087WSH0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.78■□□□□ 0.6
1700031M16RikA0A087WSH0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
1700031M16RikA0A087WSH0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
1700031M16RikA0A087WSH0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.77■□□□□ 0.6
1700031M16RikA0A087WSH0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
1700031M16RikA0A087WSH0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
1700031M16RikA0A087WSH0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
1700031M16RikA0A087WSH0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
1700031M16RikA0A087WSH0 Mir1199-201ENSMUST00000117015 119 ntBASIC18.77■□□□□ 0.6
1700031M16RikA0A087WSH0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
1700031M16RikA0A087WSH0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
1700031M16RikA0A087WSH0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.77■□□□□ 0.6
1700031M16RikA0A087WSH0 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.77■□□□□ 0.6
1700031M16RikA0A087WSH0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
1700031M16RikA0A087WSH0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
1700031M16RikA0A087WSH0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
1700031M16RikA0A087WSH0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
1700031M16RikA0A087WSH0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
1700031M16RikA0A087WSH0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
1700031M16RikA0A087WSH0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
1700031M16RikA0A087WSH0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
1700031M16RikA0A087WSH0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
1700031M16RikA0A087WSH0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
1700031M16RikA0A087WSH0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
1700031M16RikA0A087WSH0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
1700031M16RikA0A087WSH0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Gm12382-201ENSMUST00000122005 922 ntBASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
1700031M16RikA0A087WSH0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
1700031M16RikA0A087WSH0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
1700031M16RikA0A087WSH0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
1700031M16RikA0A087WSH0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
1700031M16RikA0A087WSH0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
1700031M16RikA0A087WSH0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
1700031M16RikA0A087WSH0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.74■□□□□ 0.59
1700031M16RikA0A087WSH0 Gm10252-201ENSMUST00000209541 832 ntBASIC18.74■□□□□ 0.59
1700031M16RikA0A087WSH0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
1700031M16RikA0A087WSH0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
1700031M16RikA0A087WSH0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
1700031M16RikA0A087WSH0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
1700031M16RikA0A087WSH0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
1700031M16RikA0A087WSH0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
1700031M16RikA0A087WSH0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
1700031M16RikA0A087WSH0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
1700031M16RikA0A087WSH0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
1700031M16RikA0A087WSH0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms