Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.15■□□□□ 0.82
Hmgn5Q9JL35 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgn5Q9JL35 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
Hmgn5Q9JL35 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Hmgn5Q9JL35 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Hmgn5Q9JL35 Gm38205-201ENSMUST00000192243 258 ntBASIC20.15■□□□□ 0.82
Hmgn5Q9JL35 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.15■□□□□ 0.82
Hmgn5Q9JL35 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Hmgn5Q9JL35 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgn5Q9JL35 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.15■□□□□ 0.82
Hmgn5Q9JL35 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgn5Q9JL35 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgn5Q9JL35 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgn5Q9JL35 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgn5Q9JL35 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Hmgn5Q9JL35 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.14■□□□□ 0.82
Hmgn5Q9JL35 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Hmgn5Q9JL35 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmgn5Q9JL35 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Hmgn5Q9JL35 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Hmgn5Q9JL35 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hmgn5Q9JL35 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.14■□□□□ 0.81
Hmgn5Q9JL35 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.14■□□□□ 0.81
Hmgn5Q9JL35 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmgn5Q9JL35 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Hmgn5Q9JL35 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Hmgn5Q9JL35 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmgn5Q9JL35 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmgn5Q9JL35 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.13■□□□□ 0.81
Hmgn5Q9JL35 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgn5Q9JL35 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgn5Q9JL35 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgn5Q9JL35 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgn5Q9JL35 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgn5Q9JL35 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.12■□□□□ 0.81
Hmgn5Q9JL35 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Hmgn5Q9JL35 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgn5Q9JL35 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Hmgn5Q9JL35 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgn5Q9JL35 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgn5Q9JL35 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Hmgn5Q9JL35 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgn5Q9JL35 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgn5Q9JL35 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgn5Q9JL35 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Hmgn5Q9JL35 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgn5Q9JL35 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgn5Q9JL35 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgn5Q9JL35 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgn5Q9JL35 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.11■□□□□ 0.81
Hmgn5Q9JL35 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgn5Q9JL35 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Hmgn5Q9JL35 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgn5Q9JL35 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Hmgn5Q9JL35 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Hmgn5Q9JL35 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.09■□□□□ 0.81
Hmgn5Q9JL35 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgn5Q9JL35 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgn5Q9JL35 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgn5Q9JL35 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgn5Q9JL35 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgn5Q9JL35 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgn5Q9JL35 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.09■□□□□ 0.81
Hmgn5Q9JL35 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgn5Q9JL35 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms