Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scube3Q66PY1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scube3Q66PY1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.73■□□□□ 0.59
Scube3Q66PY1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Gm42545-201ENSMUST00000202755 922 ntBASIC18.73■□□□□ 0.59
Scube3Q66PY1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scube3Q66PY1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.72■□□□□ 0.59
Scube3Q66PY1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.72■□□□□ 0.59
Scube3Q66PY1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Gm18025-201ENSMUST00000221733 862 ntBASIC18.72■□□□□ 0.59
Scube3Q66PY1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Gm10812-201ENSMUST00000099864 546 ntBASIC18.72■□□□□ 0.59
Scube3Q66PY1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scube3Q66PY1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scube3Q66PY1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scube3Q66PY1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scube3Q66PY1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scube3Q66PY1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scube3Q66PY1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scube3Q66PY1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scube3Q66PY1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scube3Q66PY1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Scube3Q66PY1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Scube3Q66PY1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scube3Q66PY1 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.71■□□□□ 0.59
Scube3Q66PY1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.71■□□□□ 0.59
Scube3Q66PY1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
Scube3Q66PY1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scube3Q66PY1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scube3Q66PY1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Scube3Q66PY1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Scube3Q66PY1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Scube3Q66PY1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scube3Q66PY1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scube3Q66PY1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scube3Q66PY1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scube3Q66PY1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scube3Q66PY1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scube3Q66PY1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scube3Q66PY1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scube3Q66PY1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.69■□□□□ 0.58
Scube3Q66PY1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.69■□□□□ 0.58
Scube3Q66PY1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.69■□□□□ 0.58
Scube3Q66PY1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scube3Q66PY1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Scube3Q66PY1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.69■□□□□ 0.58
Scube3Q66PY1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.69■□□□□ 0.58
Scube3Q66PY1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.68■□□□□ 0.58
Scube3Q66PY1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms