Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.66■□□□□ 0.9
Foxd1Q61345 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd1Q61345 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd1Q61345 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Foxd1Q61345 Flg-201ENSMUST00000050758 1488 ntBASIC20.66■□□□□ 0.9
Foxd1Q61345 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd1Q61345 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Foxd1Q61345 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd1Q61345 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd1Q61345 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd1Q61345 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd1Q61345 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd1Q61345 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd1Q61345 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxd1Q61345 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxd1Q61345 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Foxd1Q61345 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxd1Q61345 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxd1Q61345 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Foxd1Q61345 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxd1Q61345 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxd1Q61345 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxd1Q61345 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxd1Q61345 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Foxd1Q61345 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
Foxd1Q61345 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Foxd1Q61345 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxd1Q61345 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxd1Q61345 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.64■□□□□ 0.89
Foxd1Q61345 Gm27463-201ENSMUST00000183569 57 ntBASIC20.64■□□□□ 0.89
Foxd1Q61345 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxd1Q61345 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxd1Q61345 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxd1Q61345 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxd1Q61345 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxd1Q61345 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxd1Q61345 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxd1Q61345 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxd1Q61345 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Foxd1Q61345 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Foxd1Q61345 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxd1Q61345 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Foxd1Q61345 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxd1Q61345 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Foxd1Q61345 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxd1Q61345 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxd1Q61345 Gm24589-201ENSMUST00000116692 94 ntBASIC20.63■□□□□ 0.89
Foxd1Q61345 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Foxd1Q61345 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.63■□□□□ 0.89
Foxd1Q61345 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxd1Q61345 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.63■□□□□ 0.89
Foxd1Q61345 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Foxd1Q61345 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxd1Q61345 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Foxd1Q61345 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.63■□□□□ 0.89
Foxd1Q61345 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Foxd1Q61345 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Foxd1Q61345 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.62■□□□□ 0.89
Foxd1Q61345 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxd1Q61345 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Foxd1Q61345 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxd1Q61345 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxd1Q61345 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Foxd1Q61345 Gm18733-201ENSMUST00000173950 856 ntBASIC20.62■□□□□ 0.89
Foxd1Q61345 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Foxd1Q61345 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.62■□□□□ 0.89
Foxd1Q61345 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Foxd1Q61345 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Foxd1Q61345 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Foxd1Q61345 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.62■□□□□ 0.89
Foxd1Q61345 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxd1Q61345 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxd1Q61345 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Foxd1Q61345 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Foxd1Q61345 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Foxd1Q61345 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd1Q61345 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd1Q61345 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd1Q61345 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd1Q61345 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Foxd1Q61345 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Foxd1Q61345 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.61■□□□□ 0.89
Foxd1Q61345 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd1Q61345 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.61■□□□□ 0.89
Foxd1Q61345 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.61■□□□□ 0.89
Foxd1Q61345 Gm2213-201ENSMUST00000197485 688 ntBASIC20.61■□□□□ 0.89
Foxd1Q61345 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.61■□□□□ 0.89
Foxd1Q61345 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd1Q61345 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd1Q61345 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd1Q61345 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd1Q61345 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd1Q61345 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd1Q61345 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd1Q61345 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Foxd1Q61345 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd1Q61345 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Foxd1Q61345 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Foxd1Q61345 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Foxd1Q61345 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms