Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.19■□□□□ 0.5
Thumpd3P97770 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd3P97770 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd3P97770 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd3P97770 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd3P97770 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd3P97770 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd3P97770 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd3P97770 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.18■□□□□ 0.5
Thumpd3P97770 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.18■□□□□ 0.5
Thumpd3P97770 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Thumpd3P97770 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd3P97770 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.18■□□□□ 0.5
Thumpd3P97770 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Thumpd3P97770 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Thumpd3P97770 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Thumpd3P97770 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.17■□□□□ 0.5
Thumpd3P97770 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.17■□□□□ 0.5
Thumpd3P97770 Mir5133-201ENSMUST00000174955 77 ntBASIC18.17■□□□□ 0.5
Thumpd3P97770 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Thumpd3P97770 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Thumpd3P97770 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Thumpd3P97770 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Thumpd3P97770 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Thumpd3P97770 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Thumpd3P97770 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Thumpd3P97770 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Thumpd3P97770 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Thumpd3P97770 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.16■□□□□ 0.5
Thumpd3P97770 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thumpd3P97770 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thumpd3P97770 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Thumpd3P97770 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thumpd3P97770 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thumpd3P97770 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thumpd3P97770 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.16■□□□□ 0.5
Thumpd3P97770 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Thumpd3P97770 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thumpd3P97770 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.16■□□□□ 0.5
Thumpd3P97770 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Thumpd3P97770 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thumpd3P97770 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Thumpd3P97770 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Thumpd3P97770 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thumpd3P97770 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd3P97770 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd3P97770 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd3P97770 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd3P97770 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd3P97770 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.15■□□□□ 0.5
Thumpd3P97770 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.15■□□□□ 0.5
Thumpd3P97770 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
Thumpd3P97770 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd3P97770 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd3P97770 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd3P97770 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd3P97770 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd3P97770 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd3P97770 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd3P97770 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd3P97770 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd3P97770 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Thumpd3P97770 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd3P97770 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd3P97770 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.14■□□□□ 0.49
Thumpd3P97770 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd3P97770 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.14■□□□□ 0.49
Thumpd3P97770 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.14■□□□□ 0.49
Thumpd3P97770 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd3P97770 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd3P97770 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Thumpd3P97770 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd3P97770 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Thumpd3P97770 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd3P97770 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd3P97770 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd3P97770 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd3P97770 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd3P97770 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Thumpd3P97770 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd3P97770 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd3P97770 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd3P97770 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd3P97770 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd3P97770 Gm13146-201ENSMUST00000118508 780 ntBASIC18.13■□□□□ 0.49
Thumpd3P97770 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd3P97770 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.13■□□□□ 0.49
Thumpd3P97770 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Thumpd3P97770 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd3P97770 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd3P97770 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd3P97770 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Thumpd3P97770 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Thumpd3P97770 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Thumpd3P97770 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd3P97770 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd3P97770 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Thumpd3P97770 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Thumpd3P97770 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.12■□□□□ 0.49
Thumpd3P97770 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms