Protein–RNA interactions for Protein: Q8R2U0

Seh1l, Nucleoporin SEH1, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Seh1lQ8R2U0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Seh1lQ8R2U0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Seh1lQ8R2U0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Seh1lQ8R2U0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Seh1lQ8R2U0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Seh1lQ8R2U0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Seh1lQ8R2U0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Seh1lQ8R2U0 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 Gm11927-201ENSMUST00000118472 759 ntBASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Seh1lQ8R2U0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Seh1lQ8R2U0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Seh1lQ8R2U0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Seh1lQ8R2U0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Seh1lQ8R2U0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Seh1lQ8R2U0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Seh1lQ8R2U0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Seh1lQ8R2U0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Seh1lQ8R2U0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Seh1lQ8R2U0 Flg-201ENSMUST00000050758 1488 ntBASIC16.18■□□□□ 0.18
Seh1lQ8R2U0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Seh1lQ8R2U0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Seh1lQ8R2U0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Seh1lQ8R2U0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Seh1lQ8R2U0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Seh1lQ8R2U0 Gm10812-201ENSMUST00000099864 546 ntBASIC16.18■□□□□ 0.18
Seh1lQ8R2U0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms