Protein–RNA interactions for Protein: Q8CDN1

Uncharacterized protein C3orf20 homolog, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CDN1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q8CDN1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q8CDN1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q8CDN1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q8CDN1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q8CDN1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q8CDN1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Q8CDN1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q8CDN1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Q8CDN1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q8CDN1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q8CDN1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q8CDN1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q8CDN1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q8CDN1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q8CDN1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Q8CDN1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Q8CDN1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q8CDN1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q8CDN1 Gm12382-201ENSMUST00000122005 922 ntBASIC18.48■□□□□ 0.55
Q8CDN1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Q8CDN1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q8CDN1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q8CDN1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q8CDN1 Gm5417-201ENSMUST00000079706 384 ntBASIC18.48■□□□□ 0.55
Q8CDN1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q8CDN1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q8CDN1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Q8CDN1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q8CDN1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q8CDN1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q8CDN1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Q8CDN1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Q8CDN1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.47■□□□□ 0.55
Q8CDN1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q8CDN1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Q8CDN1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Q8CDN1 Gm21814-202ENSMUST00000203277 873 ntBASIC18.47■□□□□ 0.55
Q8CDN1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Q8CDN1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Q8CDN1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q8CDN1 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.47■□□□□ 0.55
Q8CDN1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q8CDN1 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.47■□□□□ 0.55
Q8CDN1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q8CDN1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q8CDN1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q8CDN1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Q8CDN1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Q8CDN1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q8CDN1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.46■□□□□ 0.55
Q8CDN1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Q8CDN1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q8CDN1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.46■□□□□ 0.55
Q8CDN1 Tgds-204ENSMUST00000228543 1594 ntBASIC18.46■□□□□ 0.55
Q8CDN1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q8CDN1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8CDN1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.45■□□□□ 0.54
Q8CDN1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8CDN1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8CDN1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Q8CDN1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.45■□□□□ 0.54
Q8CDN1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Q8CDN1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.45■□□□□ 0.54
Q8CDN1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Q8CDN1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8CDN1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8CDN1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8CDN1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Q8CDN1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8CDN1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q8CDN1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q8CDN1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q8CDN1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.44■□□□□ 0.54
Q8CDN1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Q8CDN1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Q8CDN1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Q8CDN1 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.44■□□□□ 0.54
Q8CDN1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q8CDN1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Q8CDN1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.44■□□□□ 0.54
Q8CDN1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q8CDN1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q8CDN1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q8CDN1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q8CDN1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.44■□□□□ 0.54
Q8CDN1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Q8CDN1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Q8CDN1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.43■□□□□ 0.54
Q8CDN1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q8CDN1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q8CDN1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q8CDN1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.43■□□□□ 0.54
Q8CDN1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q8CDN1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q8CDN1 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.43■□□□□ 0.54
Q8CDN1 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.43■□□□□ 0.54
Q8CDN1 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.43■□□□□ 0.54
Q8CDN1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Q8CDN1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms