Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrif1Q8CDD9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrif1Q8CDD9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Lrif1Q8CDD9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrif1Q8CDD9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrif1Q8CDD9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lrif1Q8CDD9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.73■□□□□ 0.43
Lrif1Q8CDD9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.73■□□□□ 0.43
Lrif1Q8CDD9 Gm10033-202ENSMUST00000211874 928 ntBASIC17.73■□□□□ 0.43
Lrif1Q8CDD9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrif1Q8CDD9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrif1Q8CDD9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Lrif1Q8CDD9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lrif1Q8CDD9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrif1Q8CDD9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
Lrif1Q8CDD9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrif1Q8CDD9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lrif1Q8CDD9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 Tgds-204ENSMUST00000228543 1594 ntBASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 Gm26571-201ENSMUST00000181399 666 ntBASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 AV356131-201ENSMUST00000206201 750 ntBASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrif1Q8CDD9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lrif1Q8CDD9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.71■□□□□ 0.42
Lrif1Q8CDD9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lrif1Q8CDD9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Gm9988-201ENSMUST00000069786 435 ntBASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lrif1Q8CDD9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrif1Q8CDD9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrif1Q8CDD9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.69■□□□□ 0.42
Lrif1Q8CDD9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.69■□□□□ 0.42
Lrif1Q8CDD9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrif1Q8CDD9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.69■□□□□ 0.42
Lrif1Q8CDD9 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.69■□□□□ 0.42
Lrif1Q8CDD9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Lrif1Q8CDD9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Lrif1Q8CDD9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrif1Q8CDD9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrif1Q8CDD9 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.68■□□□□ 0.42
Lrif1Q8CDD9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrif1Q8CDD9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrif1Q8CDD9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lrif1Q8CDD9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrif1Q8CDD9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrif1Q8CDD9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrif1Q8CDD9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.68■□□□□ 0.42
Lrif1Q8CDD9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.68■□□□□ 0.42
Lrif1Q8CDD9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Lrif1Q8CDD9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Lrif1Q8CDD9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrif1Q8CDD9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lrif1Q8CDD9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Lrif1Q8CDD9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 111.6 ms