Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scube3Q66PY1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scube3Q66PY1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.8■□□□□ 0.6
Scube3Q66PY1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scube3Q66PY1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scube3Q66PY1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scube3Q66PY1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scube3Q66PY1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scube3Q66PY1 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.8■□□□□ 0.6
Scube3Q66PY1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Scube3Q66PY1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.8■□□□□ 0.6
Scube3Q66PY1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scube3Q66PY1 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.79■□□□□ 0.6
Scube3Q66PY1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scube3Q66PY1 Gm15375-201ENSMUST00000119510 849 ntBASIC18.79■□□□□ 0.6
Scube3Q66PY1 Gm10698-201ENSMUST00000182663 604 ntBASIC18.79■□□□□ 0.6
Scube3Q66PY1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scube3Q66PY1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scube3Q66PY1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.79■□□□□ 0.6
Scube3Q66PY1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scube3Q66PY1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scube3Q66PY1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scube3Q66PY1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.78■□□□□ 0.6
Scube3Q66PY1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Scube3Q66PY1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scube3Q66PY1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scube3Q66PY1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scube3Q66PY1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Scube3Q66PY1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scube3Q66PY1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Scube3Q66PY1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Scube3Q66PY1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scube3Q66PY1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scube3Q66PY1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.78■□□□□ 0.6
Scube3Q66PY1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scube3Q66PY1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scube3Q66PY1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.78■□□□□ 0.6
Scube3Q66PY1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scube3Q66PY1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scube3Q66PY1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Gm15378-201ENSMUST00000121894 207 ntBASIC18.77■□□□□ 0.6
Scube3Q66PY1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scube3Q66PY1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Scube3Q66PY1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scube3Q66PY1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Scube3Q66PY1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scube3Q66PY1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scube3Q66PY1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scube3Q66PY1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.76■□□□□ 0.59
Scube3Q66PY1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scube3Q66PY1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scube3Q66PY1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scube3Q66PY1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.76■□□□□ 0.59
Scube3Q66PY1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scube3Q66PY1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.75■□□□□ 0.59
Scube3Q66PY1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scube3Q66PY1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.75■□□□□ 0.59
Scube3Q66PY1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scube3Q66PY1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scube3Q66PY1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.75■□□□□ 0.59
Scube3Q66PY1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scube3Q66PY1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scube3Q66PY1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Scube3Q66PY1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scube3Q66PY1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scube3Q66PY1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scube3Q66PY1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.74■□□□□ 0.59
Scube3Q66PY1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scube3Q66PY1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scube3Q66PY1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scube3Q66PY1 Mir2861-201ENSMUST00000175539 82 ntBASIC18.74■□□□□ 0.59
Scube3Q66PY1 Mir6349-201ENSMUST00000184059 97 ntBASIC18.74■□□□□ 0.59
Scube3Q66PY1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.74■□□□□ 0.59
Scube3Q66PY1 Gm10252-201ENSMUST00000209541 832 ntBASIC18.74■□□□□ 0.59
Scube3Q66PY1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.74■□□□□ 0.59
Scube3Q66PY1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.74■□□□□ 0.59
Scube3Q66PY1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.74■□□□□ 0.59
Scube3Q66PY1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scube3Q66PY1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scube3Q66PY1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scube3Q66PY1 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.74■□□□□ 0.59
Scube3Q66PY1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scube3Q66PY1 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms