Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc4a4O88343 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc4a4O88343 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc4a4O88343 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc4a4O88343 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc4a4O88343 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc4a4O88343 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc4a4O88343 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Slc4a4O88343 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.16■□□□□ 0.98
Slc4a4O88343 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Slc4a4O88343 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc4a4O88343 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Slc4a4O88343 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc4a4O88343 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc4a4O88343 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Slc4a4O88343 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc4a4O88343 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.15■□□□□ 0.98
Slc4a4O88343 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc4a4O88343 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Slc4a4O88343 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slc4a4O88343 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.15■□□□□ 0.98
Slc4a4O88343 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.15■□□□□ 0.98
Slc4a4O88343 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.15■□□□□ 0.98
Slc4a4O88343 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.15■□□□□ 0.98
Slc4a4O88343 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.15■□□□□ 0.98
Slc4a4O88343 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Slc4a4O88343 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Slc4a4O88343 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Slc4a4O88343 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc4a4O88343 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc4a4O88343 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc4a4O88343 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slc4a4O88343 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc4a4O88343 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Slc4a4O88343 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc4a4O88343 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc4a4O88343 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.14■□□□□ 0.97
Slc4a4O88343 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.14■□□□□ 0.97
Slc4a4O88343 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Slc4a4O88343 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc4a4O88343 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc4a4O88343 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc4a4O88343 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc4a4O88343 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc4a4O88343 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc4a4O88343 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc4a4O88343 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.13■□□□□ 0.97
Slc4a4O88343 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Slc4a4O88343 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Slc4a4O88343 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc4a4O88343 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc4a4O88343 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc4a4O88343 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc4a4O88343 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc4a4O88343 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc4a4O88343 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc4a4O88343 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc4a4O88343 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Slc4a4O88343 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.12■□□□□ 0.97
Slc4a4O88343 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.12■□□□□ 0.97
Slc4a4O88343 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc4a4O88343 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc4a4O88343 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc4a4O88343 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc4a4O88343 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc4a4O88343 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc4a4O88343 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc4a4O88343 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc4a4O88343 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.11■□□□□ 0.97
Slc4a4O88343 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc4a4O88343 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc4a4O88343 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc4a4O88343 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc4a4O88343 Gm715-201ENSMUST00000117865 831 ntBASIC21.11■□□□□ 0.97
Slc4a4O88343 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.11■□□□□ 0.97
Slc4a4O88343 Gm12382-201ENSMUST00000122005 922 ntBASIC21.11■□□□□ 0.97
Slc4a4O88343 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Slc4a4O88343 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc4a4O88343 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.11■□□□□ 0.97
Slc4a4O88343 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc4a4O88343 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc4a4O88343 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc4a4O88343 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc4a4O88343 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.1■□□□□ 0.97
Slc4a4O88343 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Slc4a4O88343 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a4O88343 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a4O88343 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a4O88343 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a4O88343 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Slc4a4O88343 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a4O88343 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.1■□□□□ 0.97
Slc4a4O88343 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a4O88343 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Slc4a4O88343 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a4O88343 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a4O88343 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a4O88343 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.1■□□□□ 0.97
Slc4a4O88343 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a4O88343 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms