Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hdac1O09106 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hdac1O09106 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hdac1O09106 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hdac1O09106 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hdac1O09106 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hdac1O09106 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Hdac1O09106 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Hdac1O09106 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hdac1O09106 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hdac1O09106 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.38■■□□□ 1.01
Hdac1O09106 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.38■■□□□ 1.01
Hdac1O09106 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hdac1O09106 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hdac1O09106 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.38■■□□□ 1.01
Hdac1O09106 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hdac1O09106 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hdac1O09106 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.37■■□□□ 1.01
Hdac1O09106 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hdac1O09106 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.37■■□□□ 1.01
Hdac1O09106 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hdac1O09106 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hdac1O09106 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.37■■□□□ 1.01
Hdac1O09106 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
Hdac1O09106 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Hdac1O09106 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hdac1O09106 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hdac1O09106 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hdac1O09106 Gm45244-201ENSMUST00000211328 2200 ntBASIC21.36■■□□□ 1.01
Hdac1O09106 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hdac1O09106 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hdac1O09106 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hdac1O09106 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hdac1O09106 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.36■■□□□ 1.01
Hdac1O09106 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hdac1O09106 Gm7292-201ENSMUST00000194706 2527 ntBASIC21.36■■□□□ 1.01
Hdac1O09106 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hdac1O09106 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hdac1O09106 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Hdac1O09106 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Hdac1O09106 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hdac1O09106 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Hdac1O09106 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Hdac1O09106 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Hdac1O09106 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.35■■□□□ 1.01
Hdac1O09106 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hdac1O09106 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.35■■□□□ 1.01
Hdac1O09106 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hdac1O09106 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.35■■□□□ 1.01
Hdac1O09106 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.35■■□□□ 1.01
Hdac1O09106 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hdac1O09106 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hdac1O09106 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.35■■□□□ 1.01
Hdac1O09106 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hdac1O09106 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hdac1O09106 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hdac1O09106 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hdac1O09106 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Hdac1O09106 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hdac1O09106 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.34■■□□□ 1.01
Hdac1O09106 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hdac1O09106 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hdac1O09106 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.34■■□□□ 1.01
Hdac1O09106 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.34■■□□□ 1.01
Hdac1O09106 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hdac1O09106 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hdac1O09106 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Hdac1O09106 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hdac1O09106 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hdac1O09106 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hdac1O09106 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hdac1O09106 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hdac1O09106 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hdac1O09106 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Hdac1O09106 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Hdac1O09106 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Hdac1O09106 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hdac1O09106 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Hdac1O09106 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Hdac1O09106 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Hdac1O09106 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Hdac1O09106 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Hdac1O09106 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Hdac1O09106 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hdac1O09106 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Hdac1O09106 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Hdac1O09106 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hdac1O09106 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hdac1O09106 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hdac1O09106 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hdac1O09106 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.32■■□□□ 1
Hdac1O09106 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hdac1O09106 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hdac1O09106 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hdac1O09106 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hdac1O09106 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Hdac1O09106 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC21.31■■□□□ 1
Hdac1O09106 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hdac1O09106 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Hdac1O09106 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms