Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph3bQ9DA80 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph3bQ9DA80 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.7■□□□□ 0.74
Rsph3bQ9DA80 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph3bQ9DA80 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph3bQ9DA80 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rsph3bQ9DA80 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.7■□□□□ 0.74
Rsph3bQ9DA80 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph3bQ9DA80 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph3bQ9DA80 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph3bQ9DA80 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rsph3bQ9DA80 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph3bQ9DA80 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Rsph3bQ9DA80 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph3bQ9DA80 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.69■□□□□ 0.74
Rsph3bQ9DA80 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rsph3bQ9DA80 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.69■□□□□ 0.74
Rsph3bQ9DA80 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.69■□□□□ 0.74
Rsph3bQ9DA80 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rsph3bQ9DA80 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rsph3bQ9DA80 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rsph3bQ9DA80 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.69■□□□□ 0.74
Rsph3bQ9DA80 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Rsph3bQ9DA80 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rsph3bQ9DA80 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rsph3bQ9DA80 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rsph3bQ9DA80 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rsph3bQ9DA80 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rsph3bQ9DA80 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rsph3bQ9DA80 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rsph3bQ9DA80 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rsph3bQ9DA80 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rsph3bQ9DA80 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rsph3bQ9DA80 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rsph3bQ9DA80 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.68■□□□□ 0.74
Rsph3bQ9DA80 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rsph3bQ9DA80 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rsph3bQ9DA80 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rsph3bQ9DA80 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rsph3bQ9DA80 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rsph3bQ9DA80 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rsph3bQ9DA80 Gm15565-201ENSMUST00000118890 427 ntBASIC19.67■□□□□ 0.74
Rsph3bQ9DA80 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.67■□□□□ 0.74
Rsph3bQ9DA80 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.67■□□□□ 0.74
Rsph3bQ9DA80 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.67■□□□□ 0.74
Rsph3bQ9DA80 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rsph3bQ9DA80 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rsph3bQ9DA80 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.67■□□□□ 0.74
Rsph3bQ9DA80 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rsph3bQ9DA80 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rsph3bQ9DA80 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph3bQ9DA80 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph3bQ9DA80 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph3bQ9DA80 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.66■□□□□ 0.74
Rsph3bQ9DA80 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.66■□□□□ 0.74
Rsph3bQ9DA80 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.66■□□□□ 0.74
Rsph3bQ9DA80 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rsph3bQ9DA80 Mir5122-201ENSMUST00000175004 89 ntBASIC19.66■□□□□ 0.74
Rsph3bQ9DA80 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Rsph3bQ9DA80 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph3bQ9DA80 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph3bQ9DA80 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Rsph3bQ9DA80 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph3bQ9DA80 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.66■□□□□ 0.74
Rsph3bQ9DA80 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph3bQ9DA80 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 BC021767-201ENSMUST00000126387 1716 ntBASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph3bQ9DA80 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rsph3bQ9DA80 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph3bQ9DA80 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rsph3bQ9DA80 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph3bQ9DA80 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.64■□□□□ 0.73
Rsph3bQ9DA80 Mir6349-201ENSMUST00000184059 97 ntBASIC19.64■□□□□ 0.73
Rsph3bQ9DA80 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph3bQ9DA80 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph3bQ9DA80 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.64■□□□□ 0.73
Rsph3bQ9DA80 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph3bQ9DA80 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph3bQ9DA80 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph3bQ9DA80 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph3bQ9DA80 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rsph3bQ9DA80 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph3bQ9DA80 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rsph3bQ9DA80 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms