Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.97□□□□□ -0.01
Trim63Q38HM4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim63Q38HM4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim63Q38HM4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim63Q38HM4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim63Q38HM4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim63Q38HM4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim63Q38HM4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim63Q38HM4 Gm9939-201ENSMUST00000067161 1154 ntBASIC14.96□□□□□ -0.01
Trim63Q38HM4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim63Q38HM4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim63Q38HM4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim63Q38HM4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim63Q38HM4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim63Q38HM4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim63Q38HM4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim63Q38HM4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim63Q38HM4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim63Q38HM4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim63Q38HM4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim63Q38HM4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim63Q38HM4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim63Q38HM4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.95□□□□□ -0.02
Trim63Q38HM4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC14.95□□□□□ -0.02
Trim63Q38HM4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.95□□□□□ -0.02
Trim63Q38HM4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim63Q38HM4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim63Q38HM4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim63Q38HM4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
Trim63Q38HM4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim63Q38HM4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim63Q38HM4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim63Q38HM4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim63Q38HM4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim63Q38HM4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trim63Q38HM4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trim63Q38HM4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.94□□□□□ -0.02
Trim63Q38HM4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim63Q38HM4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim63Q38HM4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim63Q38HM4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim63Q38HM4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms