Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BckdkO55028 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
BckdkO55028 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.7■□□□□ 0.26
BckdkO55028 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.7■□□□□ 0.26
BckdkO55028 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BckdkO55028 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
BckdkO55028 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BckdkO55028 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BckdkO55028 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BckdkO55028 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.7■□□□□ 0.26
BckdkO55028 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BckdkO55028 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
BckdkO55028 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BckdkO55028 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BckdkO55028 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BckdkO55028 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
BckdkO55028 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.69■□□□□ 0.26
BckdkO55028 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BckdkO55028 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BckdkO55028 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BckdkO55028 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
BckdkO55028 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
BckdkO55028 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
BckdkO55028 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BckdkO55028 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
BckdkO55028 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.68■□□□□ 0.26
BckdkO55028 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BckdkO55028 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BckdkO55028 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.68■□□□□ 0.26
BckdkO55028 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BckdkO55028 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BckdkO55028 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BckdkO55028 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BckdkO55028 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BckdkO55028 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.68■□□□□ 0.26
BckdkO55028 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BckdkO55028 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
BckdkO55028 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.68■□□□□ 0.26
BckdkO55028 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BckdkO55028 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BckdkO55028 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BckdkO55028 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BckdkO55028 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BckdkO55028 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.67■□□□□ 0.26
BckdkO55028 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.67■□□□□ 0.26
BckdkO55028 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.67■□□□□ 0.26
BckdkO55028 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
BckdkO55028 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
BckdkO55028 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BckdkO55028 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BckdkO55028 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
BckdkO55028 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BckdkO55028 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BckdkO55028 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BckdkO55028 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.66■□□□□ 0.26
BckdkO55028 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
BckdkO55028 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.66■□□□□ 0.26
BckdkO55028 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BckdkO55028 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BckdkO55028 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BckdkO55028 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BckdkO55028 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BckdkO55028 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BckdkO55028 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BckdkO55028 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
BckdkO55028 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.65■□□□□ 0.26
BckdkO55028 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BckdkO55028 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BckdkO55028 Gm13168-201ENSMUST00000121771 632 ntBASIC16.65■□□□□ 0.26
BckdkO55028 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.65■□□□□ 0.26
BckdkO55028 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BckdkO55028 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
BckdkO55028 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.65■□□□□ 0.26
BckdkO55028 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.65■□□□□ 0.26
BckdkO55028 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BckdkO55028 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BckdkO55028 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BckdkO55028 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BckdkO55028 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BckdkO55028 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.65■□□□□ 0.26
BckdkO55028 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms