Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.47■■□□□ 1.03
Hdac1O09106 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hdac1O09106 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hdac1O09106 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hdac1O09106 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.47■■□□□ 1.03
Hdac1O09106 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hdac1O09106 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hdac1O09106 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hdac1O09106 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hdac1O09106 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hdac1O09106 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hdac1O09106 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Hdac1O09106 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hdac1O09106 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Hdac1O09106 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hdac1O09106 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hdac1O09106 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hdac1O09106 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
Hdac1O09106 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Hdac1O09106 Gm37519-201ENSMUST00000191687 2210 ntBASIC21.45■■□□□ 1.03
Hdac1O09106 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hdac1O09106 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.45■■□□□ 1.02
Hdac1O09106 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hdac1O09106 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hdac1O09106 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Hdac1O09106 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hdac1O09106 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hdac1O09106 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hdac1O09106 Gm43548-201ENSMUST00000197139 2353 ntBASIC21.45■■□□□ 1.02
Hdac1O09106 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hdac1O09106 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hdac1O09106 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Hdac1O09106 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hdac1O09106 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hdac1O09106 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.44■■□□□ 1.02
Hdac1O09106 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.44■■□□□ 1.02
Hdac1O09106 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hdac1O09106 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hdac1O09106 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Hdac1O09106 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.43■■□□□ 1.02
Hdac1O09106 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hdac1O09106 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hdac1O09106 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hdac1O09106 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hdac1O09106 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Hdac1O09106 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hdac1O09106 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hdac1O09106 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hdac1O09106 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Hdac1O09106 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Hdac1O09106 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.42■■□□□ 1.02
Hdac1O09106 Gm6420-201ENSMUST00000193885 723 ntBASIC21.42■■□□□ 1.02
Hdac1O09106 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hdac1O09106 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hdac1O09106 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hdac1O09106 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hdac1O09106 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hdac1O09106 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hdac1O09106 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hdac1O09106 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC21.41■■□□□ 1.02
Hdac1O09106 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Hdac1O09106 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.41■■□□□ 1.02
Hdac1O09106 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hdac1O09106 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hdac1O09106 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.41■■□□□ 1.02
Hdac1O09106 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hdac1O09106 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.41■■□□□ 1.02
Hdac1O09106 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hdac1O09106 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
Hdac1O09106 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hdac1O09106 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
Hdac1O09106 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hdac1O09106 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.41■■□□□ 1.02
Hdac1O09106 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hdac1O09106 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Hdac1O09106 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hdac1O09106 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hdac1O09106 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC21.4■■□□□ 1.02
Hdac1O09106 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Hdac1O09106 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Hdac1O09106 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.4■■□□□ 1.02
Hdac1O09106 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.4■■□□□ 1.02
Hdac1O09106 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hdac1O09106 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Hdac1O09106 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hdac1O09106 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hdac1O09106 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hdac1O09106 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Hdac1O09106 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hdac1O09106 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Hdac1O09106 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hdac1O09106 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hdac1O09106 Nespas-201ENSMUST00000143738 1083 ntBASIC21.39■■□□□ 1.01
Hdac1O09106 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hdac1O09106 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hdac1O09106 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.39■■□□□ 1.01
Hdac1O09106 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hdac1O09106 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hdac1O09106 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hdac1O09106 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms