Protein–RNA interactions for Protein: A0A0G2JDV4

Igkv5-39, Immunoglobulin kappa variable 5-39 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-39A0A0G2JDV4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.05■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.05■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.04■□□□□ 0.48
Igkv5-39A0A0G2JDV4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.04■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Gm5417-201ENSMUST00000079706 384 ntBASIC18.04■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Odf3b-204ENSMUST00000227834 930 ntBASIC18.02■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-39A0A0G2JDV4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.02■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.01■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Timm23-208ENSMUST00000226683 750 ntBASIC18■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Gm35558-201ENSMUST00000222675 2219 ntBASIC18■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-39A0A0G2JDV4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms