Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smg8Q8VE18 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smg8Q8VE18 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.29■□□□□ 0.68
Smg8Q8VE18 Mir2861-201ENSMUST00000175539 82 ntBASIC19.29■□□□□ 0.68
Smg8Q8VE18 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smg8Q8VE18 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smg8Q8VE18 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.29■□□□□ 0.68
Smg8Q8VE18 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smg8Q8VE18 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smg8Q8VE18 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smg8Q8VE18 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.29■□□□□ 0.68
Smg8Q8VE18 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.28■□□□□ 0.68
Smg8Q8VE18 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smg8Q8VE18 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.28■□□□□ 0.68
Smg8Q8VE18 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Smg8Q8VE18 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smg8Q8VE18 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smg8Q8VE18 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Smg8Q8VE18 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smg8Q8VE18 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smg8Q8VE18 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smg8Q8VE18 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Smg8Q8VE18 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smg8Q8VE18 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smg8Q8VE18 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smg8Q8VE18 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smg8Q8VE18 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Smg8Q8VE18 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smg8Q8VE18 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smg8Q8VE18 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smg8Q8VE18 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.26■□□□□ 0.67
Smg8Q8VE18 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.26■□□□□ 0.67
Smg8Q8VE18 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Smg8Q8VE18 Gm5417-201ENSMUST00000079706 384 ntBASIC19.26■□□□□ 0.67
Smg8Q8VE18 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smg8Q8VE18 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smg8Q8VE18 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smg8Q8VE18 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smg8Q8VE18 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smg8Q8VE18 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smg8Q8VE18 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smg8Q8VE18 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smg8Q8VE18 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smg8Q8VE18 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smg8Q8VE18 Gm12382-201ENSMUST00000122005 922 ntBASIC19.25■□□□□ 0.67
Smg8Q8VE18 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.25■□□□□ 0.67
Smg8Q8VE18 Gm21814-202ENSMUST00000203277 873 ntBASIC19.25■□□□□ 0.67
Smg8Q8VE18 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smg8Q8VE18 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smg8Q8VE18 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smg8Q8VE18 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smg8Q8VE18 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smg8Q8VE18 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.25■□□□□ 0.67
Smg8Q8VE18 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg8Q8VE18 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Smg8Q8VE18 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg8Q8VE18 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.24■□□□□ 0.67
Smg8Q8VE18 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg8Q8VE18 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg8Q8VE18 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg8Q8VE18 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg8Q8VE18 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.24■□□□□ 0.67
Smg8Q8VE18 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.24■□□□□ 0.67
Smg8Q8VE18 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.24■□□□□ 0.67
Smg8Q8VE18 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Smg8Q8VE18 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smg8Q8VE18 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smg8Q8VE18 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smg8Q8VE18 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smg8Q8VE18 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Smg8Q8VE18 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Smg8Q8VE18 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smg8Q8VE18 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smg8Q8VE18 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smg8Q8VE18 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smg8Q8VE18 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.23■□□□□ 0.67
Smg8Q8VE18 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smg8Q8VE18 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smg8Q8VE18 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg8Q8VE18 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.22■□□□□ 0.67
Smg8Q8VE18 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.22■□□□□ 0.67
Smg8Q8VE18 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smg8Q8VE18 Gm13836-201ENSMUST00000121159 501 ntBASIC19.22■□□□□ 0.67
Smg8Q8VE18 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms