Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.64■□□□□ 0.25
Col10a1Q05306 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col10a1Q05306 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col10a1Q05306 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col10a1Q05306 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col10a1Q05306 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col10a1Q05306 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.64■□□□□ 0.25
Col10a1Q05306 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col10a1Q05306 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col10a1Q05306 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col10a1Q05306 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.64■□□□□ 0.25
Col10a1Q05306 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col10a1Q05306 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.64■□□□□ 0.25
Col10a1Q05306 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col10a1Q05306 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col10a1Q05306 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col10a1Q05306 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Col10a1Q05306 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col10a1Q05306 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.63■□□□□ 0.25
Col10a1Q05306 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.63■□□□□ 0.25
Col10a1Q05306 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col10a1Q05306 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.63■□□□□ 0.25
Col10a1Q05306 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col10a1Q05306 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col10a1Q05306 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col10a1Q05306 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col10a1Q05306 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col10a1Q05306 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col10a1Q05306 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col10a1Q05306 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col10a1Q05306 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.62■□□□□ 0.25
Col10a1Q05306 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col10a1Q05306 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col10a1Q05306 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col10a1Q05306 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.62■□□□□ 0.25
Col10a1Q05306 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col10a1Q05306 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.62■□□□□ 0.25
Col10a1Q05306 Gm2559-201ENSMUST00000201323 363 ntBASIC16.62■□□□□ 0.25
Col10a1Q05306 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.62■□□□□ 0.25
Col10a1Q05306 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col10a1Q05306 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col10a1Q05306 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col10a1Q05306 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col10a1Q05306 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col10a1Q05306 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Col10a1Q05306 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col10a1Q05306 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col10a1Q05306 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col10a1Q05306 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col10a1Q05306 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col10a1Q05306 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Col10a1Q05306 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.61■□□□□ 0.25
Col10a1Q05306 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col10a1Q05306 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col10a1Q05306 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col10a1Q05306 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col10a1Q05306 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col10a1Q05306 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col10a1Q05306 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col10a1Q05306 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Col10a1Q05306 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col10a1Q05306 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.61■□□□□ 0.25
Col10a1Q05306 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col10a1Q05306 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Col10a1Q05306 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Col10a1Q05306 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col10a1Q05306 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col10a1Q05306 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col10a1Q05306 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col10a1Q05306 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col10a1Q05306 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.6■□□□□ 0.25
Col10a1Q05306 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Col10a1Q05306 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col10a1Q05306 Gm12896-201ENSMUST00000118430 226 ntBASIC16.6■□□□□ 0.25
Col10a1Q05306 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.6■□□□□ 0.25
Col10a1Q05306 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col10a1Q05306 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col10a1Q05306 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Col10a1Q05306 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.6■□□□□ 0.25
Col10a1Q05306 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col10a1Q05306 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col10a1Q05306 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col10a1Q05306 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.59■□□□□ 0.25
Col10a1Q05306 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col10a1Q05306 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col10a1Q05306 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col10a1Q05306 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col10a1Q05306 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col10a1Q05306 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.59■□□□□ 0.25
Col10a1Q05306 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col10a1Q05306 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.59■□□□□ 0.25
Col10a1Q05306 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.59■□□□□ 0.25
Col10a1Q05306 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Col10a1Q05306 Gm20049-201ENSMUST00000219950 730 ntBASIC16.59■□□□□ 0.25
Col10a1Q05306 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col10a1Q05306 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col10a1Q05306 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Col10a1Q05306 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col10a1Q05306 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col10a1Q05306 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms