Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Pfdn6Q03958 Gm22325-201ENSMUST00000158904 308 ntBASIC18.14■□□□□ 0.49
Pfdn6Q03958 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.14■□□□□ 0.49
Pfdn6Q03958 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pfdn6Q03958 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pfdn6Q03958 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn6Q03958 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn6Q03958 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn6Q03958 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn6Q03958 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn6Q03958 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn6Q03958 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pfdn6Q03958 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pfdn6Q03958 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pfdn6Q03958 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pfdn6Q03958 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pfdn6Q03958 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pfdn6Q03958 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pfdn6Q03958 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pfdn6Q03958 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pfdn6Q03958 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pfdn6Q03958 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pfdn6Q03958 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pfdn6Q03958 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pfdn6Q03958 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pfdn6Q03958 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.11■□□□□ 0.49
Pfdn6Q03958 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pfdn6Q03958 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pfdn6Q03958 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
Pfdn6Q03958 Gm10849-201ENSMUST00000100397 618 ntBASIC18.11■□□□□ 0.49
Pfdn6Q03958 Gm7290-201ENSMUST00000104990 617 ntBASIC18.11■□□□□ 0.49
Pfdn6Q03958 Gm12918-201ENSMUST00000120234 636 ntBASIC18.11■□□□□ 0.49
Pfdn6Q03958 Gm15710-201ENSMUST00000121821 636 ntBASIC18.11■□□□□ 0.49
Pfdn6Q03958 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.11■□□□□ 0.49
Pfdn6Q03958 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.11■□□□□ 0.49
Pfdn6Q03958 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pfdn6Q03958 Gm5075-201ENSMUST00000196916 622 ntBASIC18.11■□□□□ 0.49
Pfdn6Q03958 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.11■□□□□ 0.49
Pfdn6Q03958 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pfdn6Q03958 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pfdn6Q03958 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pfdn6Q03958 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.11■□□□□ 0.49
Pfdn6Q03958 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.11■□□□□ 0.49
Pfdn6Q03958 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pfdn6Q03958 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pfdn6Q03958 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.11■□□□□ 0.49
Pfdn6Q03958 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn6Q03958 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pfdn6Q03958 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pfdn6Q03958 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pfdn6Q03958 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pfdn6Q03958 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pfdn6Q03958 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.09■□□□□ 0.49
Pfdn6Q03958 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Pfdn6Q03958 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.09■□□□□ 0.49
Pfdn6Q03958 Gm6365-201ENSMUST00000054711 744 ntBASIC18.09■□□□□ 0.49
Pfdn6Q03958 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pfdn6Q03958 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pfdn6Q03958 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pfdn6Q03958 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pfdn6Q03958 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pfdn6Q03958 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.09■□□□□ 0.49
Pfdn6Q03958 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms