Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc4a4O88343 Gm15375-201ENSMUST00000119510 849 ntBASIC21.31■■□□□ 1
Slc4a4O88343 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.31■■□□□ 1
Slc4a4O88343 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc4a4O88343 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.31■■□□□ 1
Slc4a4O88343 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slc4a4O88343 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.31■■□□□ 1
Slc4a4O88343 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slc4a4O88343 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.31■■□□□ 1
Slc4a4O88343 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc4a4O88343 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc4a4O88343 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Slc4a4O88343 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc4a4O88343 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Slc4a4O88343 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Slc4a4O88343 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Slc4a4O88343 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc4a4O88343 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Slc4a4O88343 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.3■■□□□ 1
Slc4a4O88343 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.3■■□□□ 1
Slc4a4O88343 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Slc4a4O88343 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc4a4O88343 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc4a4O88343 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.3■■□□□ 1
Slc4a4O88343 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc4a4O88343 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Slc4a4O88343 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.3■■□□□ 1
Slc4a4O88343 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Slc4a4O88343 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc4a4O88343 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc4a4O88343 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc4a4O88343 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.29■■□□□ 1
Slc4a4O88343 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc4a4O88343 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.29■■□□□ 1
Slc4a4O88343 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc4a4O88343 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc4a4O88343 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc4a4O88343 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc4a4O88343 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Slc4a4O88343 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc4a4O88343 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc4a4O88343 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc4a4O88343 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Slc4a4O88343 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc4a4O88343 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.28■■□□□ 1
Slc4a4O88343 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc4a4O88343 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc4a4O88343 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc4a4O88343 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Slc4a4O88343 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc4a4O88343 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Slc4a4O88343 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc4a4O88343 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.27■■□□□ 1
Slc4a4O88343 Tgds-204ENSMUST00000228543 1594 ntBASIC21.27■■□□□ 1
Slc4a4O88343 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc4a4O88343 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc4a4O88343 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc4a4O88343 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Slc4a4O88343 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc4a4O88343 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc4a4O88343 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc4a4O88343 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Slc4a4O88343 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc4a4O88343 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.27■■□□□ 1
Slc4a4O88343 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc4a4O88343 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc4a4O88343 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Slc4a4O88343 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Slc4a4O88343 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Slc4a4O88343 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc4a4O88343 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.26■□□□□ 0.99
Slc4a4O88343 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Slc4a4O88343 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.26■□□□□ 0.99
Slc4a4O88343 Gm10252-201ENSMUST00000209541 832 ntBASIC21.26■□□□□ 0.99
Slc4a4O88343 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.26■□□□□ 0.99
Slc4a4O88343 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Slc4a4O88343 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc4a4O88343 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.26■□□□□ 0.99
Slc4a4O88343 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc4a4O88343 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc4a4O88343 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.26■□□□□ 0.99
Slc4a4O88343 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc4a4O88343 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc4a4O88343 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Slc4a4O88343 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.25■□□□□ 0.99
Slc4a4O88343 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc4a4O88343 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc4a4O88343 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc4a4O88343 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc4a4O88343 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Slc4a4O88343 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc4a4O88343 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Slc4a4O88343 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc4a4O88343 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Slc4a4O88343 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Slc4a4O88343 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc4a4O88343 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.24■□□□□ 0.99
Slc4a4O88343 Gm42545-201ENSMUST00000202755 922 ntBASIC21.24■□□□□ 0.99
Slc4a4O88343 Gm18025-201ENSMUST00000221733 862 ntBASIC21.24■□□□□ 0.99
Slc4a4O88343 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms